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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38004_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_neuroblastoma-amplified_sequence-like_[Bombyx_mori]
Ontology
GO:0000149 F SNARE binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0070939 C Dsl1/NZR complex
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Transcript
Level		FPKM:5.31 TPM:4.19
ORF EntryO_BomoMG10102_3prime_partial:A_BomoMG_comp38004_c0_seq1
Sequence
(Nucleotide)
GAAAAACCAACTGCGCAAGATTGGGAGAAACTATTGAAAGACATATTGAATTTACAATCA
TCTTTATTCACCTGCATCAGTAAGACAGAATGCTATGAAATCTACGCCACGTCGTTACTA
ACGTCGGGACACTCGCCCAGCGTCCGGCTGGCGGCCGACGTCATGAACTGCTCGAAGTCG
GCGCGGGGGGACAGCCGGAAGGTGCCGTACCCTAAGGCCTTGGAGCTGGTGCTGGCCGCC
GCCACTGAGTACGTCAACTCCGCATCAGGACTCGAGGATCCCGCTCTCGATATTGCCAGG
ACGTGTCTAATGCTGATAAAAGAAAAAAATGTAAAGAAAATCGAAGAAGAGCTGGATCTG
ATCTCGTCATTTCAAATACTCAATTCGTTTGAGGTCCCGCTACTGCCCATACAAGTACGT
TTGTGCGAAGACAGACTGTCTCTGGTCGAGCAGTGCCTGAGGCTGGACCTGAACGGGTAC
CTGGCGGGCCCCAAGCTGCTGAAGCTGGCCACGCTGCTGAGGGTGGCCGGAGACGACGAG
CACACTCGCGAGGGTGAAGTACTGTCGCTGATCGGCAAGTACGCGCTGGAGGCGGGCGCC
CGCCCGCCCGCCGCACGCCCGCGACCTGTACGCCGCCGCGCTCACCTACTGCCACGCGAA
CCAGATGCACGACATGCTCACTGCTCGGTTGAGCTTGGAGTTGGAGAGTCTCCAGCAGAC
CGGCGTGTTCGTAAGGGAGCAGCAGTTCCTGACCGACCGATGGCCCTCCACAGACGACGA
GTTCGCCGACGCCATAACAACTCCGGTGATCGAGAGGAAAGATATCGTGCCCACCGCTAA
AGACAAGAAGCCACCAAGGAATTATGTCCTAAACACGTTTCAATATAAGTACGATATAAG
TGAGAAGTCGAGTCCGGAGAGCGCGGAGGTGCGCTACCCGGAGTGGTACGCGCGTGTGTA
CGGGGGCGGGGCGCGCGCGGGGGGTGACGAGGTGCCTGCGGGGGGTGATGGGGCGCCCGC
GGGGGGCGATGGGGGACACTACTCGTACGGCCGGTTCGCGATGGAGCGCCCGACCGGCAC
TGCGCATGCGCTGCTCTCCGCCTACTACATACAAAACTGTCTCGAACACGGATACACGGC
GCAGCTAGAGGCCGAATTGGTCCAGAAGTGCGGGGAAGAGCTGCTGTACAGAGACACGCC
GCTGAGCGTGGCCTGCCTGCTGCGGTCCACTCAGGAGTACGACGTGACGAAGAAGTTCTT
GGAGAGTCAGCACACGGACGCGGCCGTCAGCTGCGCGCTGTACGCGACGCTCGTGCACTG
CAACTCGGCCGCGCTGCGGGACGACGTGTACTTGACCAAGCCGACCAAAATGGCCAGGAT
GACTTTGAAGCAGAAGAACGCTTCGGAAGTGCAGCTGAAGGTGATCAACGAGTGCGTCGA
CAAGCTGACCGGCATGGGCGAGGTGGCCGCGCTGCGCAACCTCGGCGTCGCGGTCAACGG
GCTCCTCTTCAACGTCGACGACGACTACAGGCGGGAGCTCATCTACAGGCTCGCCGGGTC
TAAGGAGAAGAAGCACGTGGAGGTGGCGTGTTCTCTGGCGGACAAGTACGGGCTGGACGC
GCTGGAGATGTGGCTCGCGCACGCGGGGACCGCGGGCCGCCTCGCCGCGCCCCCCCGCCT
CGCCG
(1685 bp)

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