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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38001_c0_seq3
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_U5_small_nuclear_ribonucleoprotein_40_kDa_protein_isoform_X2_[Amyelois_transitella]
Ontology
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:1.23 TPM:0.97
ORF EntryO_BomoMG10100_5prime_partial:A_BomoMG_comp38001_c0_seq3
Sequence
(Nucleotide)
TTCCAAATCGTCTGGTGTGCCGGGAGCATTTAAAAGTGACAAGTTTCAGTTAGGTTTTGT
ACCTGAAATAGCACCACCCCAAGAGTTATGTAACAATTGAAACGTGTATAAACAACATTA
TGAGTTGACATTAATGAGTATTTCCAAAATTCCAACAGACTGGAGTTAGGTAGTCTTGTG
ACCTTGCACGGGCAGGTCCTACCATTTAGGCTGTGAAGTAGTTATGTACTCTAGTTTGAA
GGATAAGACACTGGTTATGCTACAGTTGAGACTTAGGCCTCATGTCTCAAACTGGATTAT
CACATTAACATTGCGTTGTCTATGTTCTGATAACAATTTAACACTAGACCACGAGTTTGA
TTACTAATCTAAGGTACAAATAAAAAAGTGTTAATAGGAATGGCCTTACATTGCCCCTTG
TTCAGCCCCTTACATTGACAGTCAGTGGCATATTTATTGCCATTTAAGATATTGATTAAA
TACAAAATCAAGCATTAACATTTGAACAGAACAGTGATAGTAGGGAATACTTTAGAACTT
CAACAGAATGCATACAATCCAATGTATCTCGTATTTGTATACTATTCACAGATCTCAACA
CTGCACAATAAAAGACAAATTTTGCTTATAAATTAAATGTATTCCTATATTACATTTTAC
ATATTTATATCGCTTCAGTATTACAGTTAAATGTGGAATAATAATGATGTATGTGCATCT
CTGGTTCCTGTCATTGCTACCAAATTTAATTACCAATGTGAAATTGAGTAGATTTTGCAT
TTAATCGAACAATCAACTACAAAAATATATATGCACTGATAATGTAATTTTAGAAAATCT
TTTAAATACATTAAACCCACTTTTATTTTATATTCTAGTGTAAAGGTAAATTATTTCTAA
TGTTAAATGTTCTATTTGGACTTAAGTGTTTTTTATTACAGTCAGTTTAAGTTTCATTTT
AATACATTTAATGTTTTTTTTTTTTGGCTTTATGAGTTTCCGGATCACCTGAAGTAAAAC
ATTACCAAAGCCCATGTAAATGTTTTATCCTGCTTGAGACATGAGGCGGTTTTCACAATT
GTATAGTAAGACTGATATCCACCCTGCAAACCAAAATAACCTGCCAACAGTAATACGAAC
ACATTGTCATTGATCTTTTATACACTTTTAGTAAATTAATATTGTTTTGTTTGTCTCCAC
ACCCTGTAGATTTCCAATAATCACGACCAAATTGCATTCATTATTATTTTATGTACTTGC
TTAAGATCATCAAACTCAAGACAGGAAATTGTGTAACTAAAAATTTAAAAGTAAAATCAG
TCCTCAATTTTCAATTTCTCCCAAATAAATCTGTTTATCGCTGGACACTGATAACACTAT
GGGTTCGTTTGGATGAAAGTCCACATCATTGACGGATCCTATGTGTCCAGGCAATTTGTA
AAGAACTCTTCTGGATGTTGTGTCCCAAACGTATAGGAAACGATCTGAAGAACCTGCTGA
CACCTTGGAGCCATCCTGAGACCATGCACATCTGAGCAGATTTTTCTCAAAGTTGTGTTG
GTGGCCAGACATTAATTTGACACAGCGTTCTGTTGGTGCAAACGGTCTAACGTCCCAAAT
ACGGAGTGTATTATCCATTGAATTGGACAGGAGATATGCACCATCCCATGACAATGATAA
TCCTGTAACCGTGTCTGTATGTCCTTTTATTTTCAAGGAAATCTGATTATTCCTTATATC
CCACATTTTGATGACATTGTCCACACCGCTGGATAAAATTTTTTCAGCTGTATCATTGAA
GAGTACACTTGTGACTGGATATGAACTGTCAAACGATGCAACTGGATTCCTTTTCCTTGC
ATCCCATAATTTTATGGTGTTATCATCTGAAGCTGAAACTAAGAGTTCTGGACCTCTTCT
TGCTCCTGAAACAGAGTTCACAAAGTTAGCGTGACCCTTTAACTTCTTGATTCTAGTCCC
GGTGGGTACGTCCCATACTGCTACAGTATTGTCCGTAGCTCCAGTGTACAAATGTGAACC
ATCAGGTGAGAAGCAAAGCTGCATTATTGCTCCCGTGTGACCTTTCATCACCATCACATT
CTCGCATTGACCATACACATTCCATATTAATATTTGTCTGTCAAAGCCTGCAGAAGCCAA
ATGTTTGCCTTCAGGATGAAATTTGCCTGTGAAAATTTCTCCTTGGTGTCCTTCCAACAA
CATAATTGGCGCATACAAGTTTGATGTTCGTGGAACAGATGAAGTAACAACTGCCTTTTC
TCTGGTGCCGACTACTGAGA
(2300 bp)

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