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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp38001_c0_seq2
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_U5_small_nuclear_ribonucleoprotein_40_kDa_protein_isoform_X2_[Amyelois_transitella]
Ontology
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:1.71 TPM:1.35
ORF EntryO_BomoMG10099_5prime_partial:A_BomoMG_comp38001_c0_seq2
Sequence
(Nucleotide)
TCAAAACTTACAAAATCCTTCCAACATCTTTGCTAGTGCAAATCAGAATTTGTTTAAACA
GAACGACACTCAAGGTTCACCATTTCAATTGAATATCTCGCAGCAAAATATGGATACTAA
TACCTTCCAAAAGTCAAATACACAACAATCAATTTTTGGACAAAACGTGCCTTCAGTAGA
ACAGAGTGGTGTTTATAGTAAAATGGAAGAGCTCACACCAGACGATTTGGAAGCATTTAA
AAGTGACAAGTTTCAGTTAGGTTTTGTACCTGAAATAGCACCACCCCAAGAGTTATGTAA
CAATTGAAACGTGTATAAACAACATTATGAGTTGACATTAATGAGTATTTCCAAAATTCC
AACAGACTGGAGTTAGGTAGTCTTGTGACCTTGCACGGGCAGGTCCTACCATTTAGGCTG
TGAAGTAGTTATGTACTCTAGTTTGAAGGATAAGACACTGGTTATGCTACAGTTGAGACT
TAGGCCTCATGTCTCAAACTGGATTATCACATTAACATTGCGTTGTCTATGTTCTGATAA
CAATTTAACACTAGACCACGAGTTTGATTACTAATCTAAGGTACAAATAAAAAAGTGTTA
ATAGGAATGGCCTTACATTGCCCCTTGTTCAGCCCCTTACATTGACAGTCAGTGGCATAT
TTATTGCCATTTAAGATATTGATTAAATACAAAATCAAGCATTAACATTTGAACAGAACA
GTGATAGTAGGGAATACTTTAGAACTTCAACAGAATGCATACAATCCAATGTATCTCGTA
TTTGTATACTATTCACAGATCTCAACACTGCACAATAAAAGACAAATTTTGCTTATAAAT
TAAATGTATTCCTATATTACATTTTACATATTTATATCGCTTCAGTATTACAGTTAAATG
TGGAATAATAATGATGTATGTGCATCTCTGGTTCCTGTCATTGCTACCAAATTTAATTAC
CAATGTGAAATTGAGTAGATTTTGCATTTAATCGAACAATCAACTACAAAAATATATATG
CACTGATAATGTAATTTTAGAAAATCTTTTAAATACATTAAACCCACTTTTATTTTATAT
TCTAGTGTAAAGGTAAATTATTTCTAATGTTAAATGTTCTATTTGGACTTAAGTGTTTTT
TATTACAGTCAGTTTAAGTTTCATTTTAATACATTTAATGTTTTTTTTTTTTGGCTTTAT
GAGTTTCCGGATCACCTGAAGTAAAACATTACCAAAGCCCATGTAAATGTTTTATCCTGC
TTGAGACATGAGGCGGTTTTCACAATTGTATAGTAAGACTGATATCCACCCTGCAAACCA
AAATAACCTGCCAACAGTAATACGAACACATTGTCATTGATCTTTTATACACTTTTAGTA
AATTAATATTGTTTTGTTTGTCTCCACACCCTGTAGATTTCCAATAATCACGACCAAATT
GCATTCATTATTATTTTATGTACTTGCTTAAGATCATCAAACTCAAGACAGGAAATTGTG
TAACTAAAAATTTAAAAGTAAAATCAGTCCTCAATTTTCAATTTCTCCCAAATAAATCTG
TTTATCGCTGGACACTGATAACACTATGGGTTCGTTTGGATGAAAGTCCACATCATTGAC
GGATCCTATGTGTCCAGGCAATTTGTAAAGAACTCTTCTGGATGTTGTGTCCCAAACGTA
TAGGAAACGATCTGAAGAACCTGCTGACACCTTGGAGCCATCCTGAGACCATGCACATCT
GAGCAGATTTTTCTCAAAGTTGTGTTGGTGGCCAGACATTAATTTGACACAGCGTTCTGT
TGGTGCAAACGGTCTAACGTCCCAAATACGGAGTGTATTATCCATTGAATTGGACAGGAG
ATATGCACCATCCCATGACAATGATAATCCTGTAACCGTGTCTGTATGTCCTTTTATTTT
CAAGGAAATCTGATTATTCCTTATATCCCACATTTTGATGACATTGTCCACACCGCTGGA
TAAAATTTTTTCAGCTGTATCATTGAAGAGTACACTTGTGACTGGATATGAACTGTCAAA
CGATGCAACTGGATTCCTTTTCCTTGCATCCCATAATTTTATGGTGTTATCATCTGAAGC
TGAAACTAAGAGTTCTGGACCTCTTCTTGCTCCTGAAACAGAGTTCACAAAGTTAGCGTG
ACCCTTTAACTTCTTGATTCTAGTCCCGGTGGGTACGTCCCATACTGCTACAGTATTGTC
CGTAGCTCCAGTGTACAAATGTGAACCATCAGGTGAGAAGCAAAGCTGCATTATTGCTCC
CGTGTGACCTTTCATCACCATCACATTCTCGCATTGACCATACACATTCCATATTAATAT
TTGTCTGTCAAAGCCTGCAGAAGCCAAATGTTTGCCTTCAGGATGAAATTTGCCTGTGAA
AATTTCTCCTTGGTGTCCTTCCAACAACATAATTGGCGCATACAAGTTTGATGTTCGTGG
AACAGATGAAGTAACAACTGCCTTTTCTCTGGTGCCGACTACTGAGA
(2507 bp)

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