SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp37993_c0_seq2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_TOX_high_mobility_group_box_family_member_3-like_isoform_X3_[Amyelois_transitella]
Ontology
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0034056 F estrogen response element binding
GO:0042803 F protein homodimerization activity
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051219 F phosphoprotein binding
Transcript
Level		FPKM:2.95 TPM:2.33
ORF EntryO_BomoMG10079_5prime_partial:A_BomoMG_comp37993_c0_seq2
Sequence
(Nucleotide)
ACCTTCACAGCATTCTCAGTTGCCTGGTGATGCGGAAAGCCTTCTGCCTATCCATTATTG
CTCAGCGAGCCGGCAGCAACAAACTACGCTTCATCAGATTGGTGTTGCAAACATGGCTGT
CAAAAGAACTTCACCTGATCCAATGGACAATGGAATGAACCGTGGACAGATGCAGAAAAA
GCCTAAAGTTCAGAAAAAAAAGAAAAAACGAGACCCAAATGAACCACAAAAGCCAGTATC
AGCATATGCCTTATTCTTCAGAGATACCCAAGCAGCAATCAAAGGTCAAAACCCTAATGC
TAGTTTTGGGGAAGTTTCAAAGATAGTTGCTTCAATGTGGGATGGTTTAGACTCAGAACA
TAAAAGTGTTTACAAACAAAAGACAGAAATAGCAAAAAAAGAATACCTTAAGGCTCTTGC
TGCCTACAGAGCCAGTCTAGTATCAAAGGGTGGAGAACAAGAAAACCAAGCAATGTACAA
CCACACTAATAATGGTAATGTGTGTGGAACTAACAGTGGCACCACATACAGTAACTACTA
CCAAGGACAGACTTATGGAAATAATCATTCGCCTCAGAACTATGTGCAAAATGCTTCCCC
TCAAAGATACTCTCCGCAAAATTACTCACCTGGTCAGCCACAACCCTCATATCCCGGGCC
AGCTCAACAGTATCCACCTAACTCTCAACAATCTCCTCAAAATTACCAAGCCAATATGAC
AATTGCTCCCCAAACATACCAGAATGTTCCAGCCCAATCACCACAGGGCTATCAAATAAA
CTCTTCAACGTCAAATCAGAATTGTCAACCAAATGTTGCTCAATCACCTAGAAACTACCA
ACCCACACAGTCACCAACAAATTACCCTGCAAGTTCTTCAATGTCACCACCTGGGTACCG
ACAGGTGCAGGCAACATCACCTCCAATGGGAACAGTACATCCTGCCATGCAATACCATCC
TCAACAGCAAATACAAGCAACACATGCTCAGATGCAACAGGCCCAAGTTCATCAAGTGCA
GCAGTACCAGCAACAACAACAAACTCAGCAGCAGCAGCAACAACAACAAGTCCAGCAGGT
GCAGGTACAGCAACACCAACAGATGTCGAATCAACCGCACGTCGTCATACACCAGCAGCA
GCCGCAACAACAGCAGCAGATGCAGCAACAGATGCTTGTGCCCCAAGTGAGCCAGCACCA
GCAGGTGCTCACACAGCAGGTGGGCGGGGTGCAGCAGGTCTCACAGCAGCACTGCGTGCA
GTCGCTCGGAGTGTCGGAGGAGGGCGGCCAGCAGGTGGAGATGGCTCAGCAGGTAATACC
GCTCGCCGTGGTGCAGCAGCCGCAGGCCTACATCGTGACGCCGGTCTCGCACTTCCAGAC
CCGCGTGCAGGACGCGTGGTACAGACATTGAGTAGAGTGCAGCGACTCTTCTCCTTTATT
TTTTGGCTCCGGCACGGTTTGTGCATTAGCCAGCGTCA
(1478 bp)

- SilkBase 1999-2023 -