SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp37987_c0_seq3
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_LIM/homeobox_protein_Lhx3_isoform_X5_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.84 TPM:0.66
ORF EntryO_BomoMG10069_complete:A_BomoMG_comp37987_c0_seq3
Sequence
(Nucleotide)
GTGTATATTAACTTTTACAAAATATTATTACATTAATAATATACATACAACTAATTACAG
ATAAGTATTCACATGTAACATGTTTGATATAAACAGATGTAACTAATTACATAGTAATAT
TTAAATAACAATAAACCGTCGTGTTCGCTTATGATTTCGCACGTTTTTCAGGTGATGATA
ATTCAATTGTACTGAATAGCCTACGTTATTCTTAGAGCGACATCGTTTGACGTTAATGCA
CTTCACAAAATTACATTTAATTCACACTGTCTGAATTAGTCACTCAATTAAAAGTTCACT
CGGCGCACCAATTAGCGCCTAGTTTAGGAAAGTGACAACTCGTATTCAAAGTTCCCGTTT
GACCACAAGCTCCAGCGGTTGTACGTGTGGTATGGGGTAAGGGGCGAGGAGTGGCGGGAG
GGTGTGCGGCGCGGCTGTCGGCGGGGGCGCTGGGTGCGCGTGCGCCGGCGGAGGCCGCCG
TTAGGGGAAGCCACGCGGGGAATAGTGGTGTGCCTCGCCCAGCCACGAGTCCGGTGACGG
CGGGAAGTCCGGATACCCACCCGCCGCCGGTGAAGACGAACTACTCAGATCAGAAGCACC
ACCCGCACCCGTTCCGATGCCTGCACCGCTCATTGCTTGACCGATGTTGGTATAAACGAG
GTGATCTGGTGGGTAATGGTAGTGGGGATGCGGTGGAGAATGCCCTCGTAAATATGGCGG
CGTCGCAGAGAAGCGAGCACTCGCCGCGCCTGCCCCGCCGCCACCGGCTGGGGACCCTTC
TTCAGCACCGAGCGCTACTGTACTGTAGCTATCGTTACTCAAATCGTGATGACTGAACGA
ATCCAAATCAATCTTTAGTTCGTCCTTGTCTAGTAGTCGATCGTGTCTCGGTGACCCACC
TCCGCTTTTCATCGACCTGAAGTATTGGGACCATCTCGTGCGACCGGCGTCTTTCTTCAA
ACGCTTTTCTTTTGCTCTTCTGTTCTGGAACCAAACTTGTACGACCCGCATGTCCAGACC
CGTGTCGTGTGCGAGCTGCTCCCGCACGTGTCTCGCTGGTTTCGGACTACTGCTGTATGC
ACTTTTCAGAGTCTCCAATTGTTTGGCCGTAATCGTAGTCCTGGGCCTCTTGCTTGCCGC
GTCACCGTCGAGCGAGCCATCCCCACCTGCGTTTGGTATATCTTTAGCTCTGGCAGCTTC
GTAATCCGGTTTACAGACAAGCTTTCCGTCCTCCATAAGGTAGAACTCGTCTCCTGTGTT
CAGGGTACGTGCGCAGGCGGCACAGGCGAAACACCTCAGGTGGTAGACGTGAGATTGCGC
GCGACGTACGACCTGAGTCGGCGGTATGCCCTGCCCGCAACCACTGCATTTGGTTCCGAA
ACGCTTGAAGAAGTCCTCGGTGCAGTACAACTGATTGTTCCTCGCAAAGCACTTTCCAGT
TAACAACGCGCGGCATTCGACACAGCGCAAGCAGCCGGCGTGCCACGTCCGGTCCGACAC
CTTTAACACGTACCGATCCACTATCATCTCGTGACAACCGCCACATTTTGGAATACTGGT
TTTTTTCAAAGTGCTCTTCATTACAATCCACATTTTATGCAATTTCGCGCAAGGTCCTTT
ATTCGGAGCGGGCGGGTCACTAGCTTCACTTTTCACGACACAAAAAGGACATTATTGTGT
TTGCAGATATATAACTTGAGATCGAATTCTCAATCAGACATCGGTTATCCGGTTCTTCAT
ACATTAACGCATAGCTGGCTCGCGGCAAATACCGGTGCCTAAATTCTAATCTATTATTTG
AAAAAACAAAAACGTGGAAAACCATATATCAATTTAATATACAATACTTTTAGAGTCT
(1858 bp)

- SilkBase 1999-2023 -