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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp37964_c0_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_cyclic_AMP-responsive_element-binding_protein_3-like_protein_3-B_isoform_X3_[Bombyx_mori]
Ontology
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0035497 F cAMP response element binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
Transcript
Level		FPKM:2.64 TPM:2.09
ORF EntryO_BomoMG10043_complete:A_BomoMG_comp37964_c0_seq1
Sequence
(Nucleotide)
GGGAAATGTCATGTTTCCTTTTATTTGTAAACTAGTTGTACATAAATAGTAATAAATAAA
TATTGATACAATAAAATATTTACCTCATTGAAGTGCAATTATAAAATATGTTATATAAGT
GAAGAAGTTTTATACTGTTTACAGTACTATGACCTCTACTGAGTTTTTATCGGAACAAAA
TGAATTCTAAAAATTTTCCGAAAATACAGGATTTTTTACTAAAGTATGTCTAGTAATAAG
CATTACTAAATCAAAAGTGTAAAAAAAATGGAATTCGAAGAAGGCCTCATGTCAGACACG
TGGACGGCGCCAAATGAACTCATGGAGATCTTCTCCATGGACCAGGACTATTTGGATTTT
CTCGAGGAGTCAATTCCAGATTTCAACATATGCTCTGAAAATGTATCAGAAACCTCTAAA
GCTATAAGTAGCACCTGTTCAGACAGTGGAATTTCCAGTGATCATGCTGAATTCGATTTT
GAACAGCAACTGTCCCCGTTTCTCATACAAAACTCGTGCGAGGAGGAACTGCCGGCTCCG
ATAGCCGACGGACCCACGAGCCCCAGCACCCAGGATGTCGTCATCCGGGATTCGAATGAT
ACGTCCAATAGCTCCACGGACCTCGCGGACGACGTCTTCGATATGCAGGACTTCGAGCAG
AACGTCGTCCCCGGATTCATTAATGCGAATACATTCCACAGCCCGGATGACTCAGGAAGC
GAACGCAGCGACGACGACGACGACCACAAGGAGACTCAGGTCAGCGACGGTCGCAACGGG
TACCCGCGCCTCGTGCTAACCGCCGAGGAGCGCCGCCTCTTGGCGAAGGAGGGCATCACG
CTACCCACCAGCTATCCGCTCACGAAACACGAGGAACGGGAGCTGAAGAGGATCAGACGC
AAAATCAGGAACAAGATCTCAGCTCAGGACTCGAGGAAACGCAAGAAGGAATATGTCGAT
GGACTCGAAGACAGGGTAAAACAGTGTACCGCAGAGAACCAGACGTTAATTAGGAGGATA
AAAATACTGCAGTCACAGAACCAGTCGCTGAGTGCTCAGTTGAAACGTTTACAGAACGTA
TTAAAGGGTGCGAGTGGTAGCAGTACGAACAAGTCTGCCCAGCCGGCCACGTGTCTGCTA
GTGCTGCTGTTGTCCGTGGCGCTAGTGGCGCTGCCCTCCCTCCGCGACGAGGCCCCGCCC
CGCGCCTCGCCCGCCTCCCCCGCCGCGCCCGCCTCCCCCGCAGTCACGCGGGCTCTACTC
TCCGCCACCAACAAAATGACGTTGGATGAGACGGTGATCGACGATGGAGAGTTCAACATG
GACGAGCTGATCACCTTCAACCGCCCGCACTCGGACCACGACTACCAGGTCGTCAAGAGC
CTAGACACTCACAAGGTTCTGCCAAACGGCTACGTCGACCTCCCCATAGACGAGGACTGG
CCGCCTAATCTCAAGAAACGTATGAAAAAACTCGAATTCGACTACGAAGACGGCCGGGAT
TACCTAACGCCCGTAGTCAAAGAGGAGAATTACGGCAGTTACAAGATCGAAGCGAAAATC
AAACCGGATCTCACTGAGGATTTCTTGACGAACACACTGCTGTCCACGGGACGGAAATTA
GGAGAATTGTTCGACATTATGCCGCCGATACCCGTCAAAAACGAAGACATCGTCATTGAG
GAGGTATCCGACCACGAGACCAGAAACACGACCGAAGTCAGGAGTTTTGTTGTCAACGGC
ACCGCTAATAACTTTTAAATATACAATTATTTAATTCCTTTAAAAATTCCGTTTACTTTT
TTTTTGTTACCTTTTAATAATAATTTTACTATTAGATTTGTTTCCTGAATATTTGTGTTT
TTTTTATTTGTGAAGACGATGTATGTGACTCATGATTCCATATTTTAAGATCAATTTTTA
TTTTAATAATTTTAGTCTTTTAGATTTTATGTGTTAGTGAGATTGTGAAGAATGATTATT
ACGTAAATTAAGATTATAATTTTATATTAAATTACTATATGCGGAGAGTTTATAATTTAT
TTTTAAAAGTCAAAATTAATATATATACAATCAATTTTTATATTTTTTACAGAGAAATTA
CACTTTCACTGTGCATGTCTATCTATAATTTTAAGCATTTTATTTTGGGTGCAATTACAT
TTTAGTTACAGATTTAATTGTTCTAGTAAAAGTATAGTTCTATCTCAATATTAGTTTTAG
ATTATTTTATATTATCTACTTACAGAGCGGACAAGATTCACTGTTGTGTTATCCTATACT
GATTATTTTGGTTCGAATAAATATTTTATTGAAAAAACAAAA
(2322 bp)

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