SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp37948_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_neuroblastoma-amplified_sequence-like_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0043009 P chordate embryonic development
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Transcript
Level		FPKM:7.03 TPM:5.55
ORF EntryO_BomoMG10001_5prime_partial:A_BomoMG_comp37948_c0_seq1
Sequence
(Nucleotide)
GCCTGCGCTGCGGCGCCGACCTGCTGCGCGAGCACTGGCCGCACCGCGCCGCCGCCGTCA
CAGAGGAGGCATTGGCGAGTGAAGAAGGTCGACGTGAATTATTCGAGAAGTTCCTTGAGG
AGTCCGACACTTGGCAACAGAGGAAGGCTCTGGTCGACGTGCTGAACTGCTGGCCTCCGA
TTACTTCCAGCGAGTCGGCGAGTCTGCAGTGCGAGTACCTGTACGCGCTGCTGACGAACC
CTCTGGACAGCAAGGAGAGCTTGGAGCTCATCAAGGCGCTGCTCAGCCGGCCCGTCCTTA
GCGAGCAGGAAATTAAATGGCTGATCGACGACGTCGTCCCGGACGCAGTCGTGAACGCCA
TCTGGATTCTCTTGCTCAGTAAATATCAACATTCCAAAGAAGAGATACTGAACATATTGC
AACAGCACAAGGAAGAAGTTGCGAAACAAGAAATCGACGATGAGCTGGTCGCGGAGTTGC
TCCGCAACGACTTGTTCGTGAGTCTGGTCGGCACTCCGCTGTACCCCAAAATGCTCAGCT
ACATCATCAGCCGGGAGGGCGGCTCCGAGGACGCGCCGTACTCCGTGCCGTGGGCCACGC
GAGAGCTGCTGAAGGCCAACTACCTGGCCGAGGCCGGGCACCTCCGTCTCATGGCTGATG
GCGTCCCGCCGCCCCTGCGAGGGTTCTCTCAGTCCGTTCTCTATTGTAAGAATATCTTTA
AGAAATAAGTTTTATCTGTTAAATCAATTGTGAACAATGTAAACATTATTATTACGTTGC
CCTATTTATTTCTGTTTAA
(799 bp)

- SilkBase 1999-2023 -