SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp22338_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_epidermal_retinal_dehydrogenase_isoform_X1_[Bombyx_mori]
Ontology
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0043616 P keratinocyte proliferation
GO:0050908 P detection of light stimulus involved in visual perception
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:27.49 TPM:21.72
ORF EntryO_BomoMG2774_complete:A_BomoMG_comp22338_c0_seq1
Sequence
(Nucleotide)
GACAGCTTTGATGTTAGATAAATATATGTATTACAGTAAAAATTAACATGTGACCTCACA
AAAGTTTAAGAATTCATGCCGTAATTTTCTTAATAAAATTATTATCTTCATACTAAACTA
TTGGTACTTTTCATAAATTTACAAAATAAATTTCATTATATCAATCCTCAGGCTTCCTTT
ATTTCCATAATTTTCTTATCAATCTTTTTTATATAATTCATTCTATCTAAAAATAAACAA
CAATCTCAGTCTTATCAACACCCTTCTTGACTCAGGATTTAACAACATTAGTACTTTTAA
ATGAAATTTGTAGGAAACAAATTTCTTTTTTAACATAAAAAAAAATGTATTTTTTTCTTA
GTAAACTATTTATAAACATATTATTACTTAAGACCAAAATAAATAAAAAAAGATGTTGAA
ATTGTTTGAGTTTAATTCGCTCAATAGTCTTACTGAAATAAATAAGATAATCCCTTAAAT
GTATATTCTTTGAATGGAACTAAAAGTAAAAAATATATATTAAAAAACTCATAAATTTTG
AAAGGACCTTTTCTACGGGACAAAACTTTCTTTAATATCCTTACATTAGTAAATAATTAT
TTTTCACGTTATGCCATACTGTGAACAAGTCACACCGAACTCAAGTGAGTTGCAAAAGTT
ATCAATTAGTAACATCAAGCAAAATCAACACCTGTGTCGAGTAAGTCCCTTATTAGTACT
GTTGCTCGGCGCGGTAGAATACGTAACAAATGACCAAGACATAACAAATGTTTTGGAACT
GATGCTTCCGGGTAGTTCCTCCTGACGCTGTCCAGGATCGATGATGCTGCTTCTACAGGT
GATATAGTCCCGAAATAGCTGGGTATCCTTAATTTCACATCGTGATACTCATCATTCACG
ATGAAAGGATATATGTGAATCAATGTCACATGCACATTATCAATCTTATTTATTCTGAGA
TCCTCCATCAGCGACTCCGCTAACCCCTGCACTGCAAACTGAGCAACACTGAGCGGCATC
TTATCTTTTATGTAGCTGAGACCAGCTACAGAAGTCAAAGCCACAATGTGCCCGTGGTCT
CTGGTTTTCATTTCTGGTAAGAAGTTGTCTATGAGCCAGAAATATGATGTCAATGTCAAA
TCCAATGTTTTGTGTATATCTTGAGGTGGTTGTGTCATTAAAGACCTAGGGCTGGGTATA
CCACAGCAATAGAACAACATGCTGACAAAACCAACATCTTTCTTAATTTGTGCTGCTAAT
TCTTCTATTTTCTCTCTTCTTGTAACATCACAAATGTAACTGGCTGCTGATCCACCTCTA
AGTTTGATGTGGTCCACAGTATCTTCATTATTCTGATGATTGATGTCAATACACAGTACT
ATTGCCCCTAGATCTGCAAGTTGCATAGCTATTTGTCGTCCAACACCTCTTCCGGAGCCA
ATGACCATAGCAGTTTCCAATCTGACAGTTTTCAATGGTGGCGGTCTGAACAATTCATAT
GCAGCTTGAAATGTTGCGCATATTGCATTGAACACAACCCAAGCAACATCCACCATCAAA
ATGCAAAATGAATAGAGTCGTAGTAACATTTTGATTGGAAAAATGAAATGTAATAACACA
GACAGTACATCCATTTGTTTGGATTCCATTAGTGTTTCACAAGATATATATTTCCAAATT
ACCCGCGAATAACAATCGCTTATCTGAATACAGAATAAGGCACCCAACACAGTGCTTTTA
ATGCAAATGCCACTGCGTGCTCGAAGCGGAACTCACAGAAAACAATGAACTTTTG
(1795 bp)

- SilkBase 1999-2023 -