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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp22279_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_SMURF2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006464 P cellular protein modification process
GO:0007398 P ectoderm development
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0030509 P BMP signaling pathway
GO:0030514 P negative regulation of BMP signaling pathway
GO:0042787 P ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:3.76 TPM:2.97
ORF EntryO_BomoMG2738_5prime_partial:A_BomoMG_comp22279_c0_seq1
Sequence
(Nucleotide)
CTAAGCAATATCCTGCTAAAACGCTAGAAGTTATTGTCTGACGTTATTAACAACATCTCT
TGTGATCGTGTAAAATTATTTATTTCTTTTATTTGAAGATTTTATTTTACTTATTTCCTG
TACCTTTTGTTTCAATTATCGTTACCTAGAAATCTTCATCAAAAAAGGTCAAAGTTCAAA
AAATTTTGATCATCTGTAATGGCCATTTTATATGATATTCTAGAGTGCAGTTTTTTTTAG
ATAAGCACTGAGGCCTGGACCCAGAACAGATTTGTGCAGGCTCACAAAATTTTATTTTAT
TTAATAATTTATGTAACCCAAATTATCGTGAACACATTACTTGTTATAGCGGAATGCAAT
GATCTCTCTAATGTTTGTTTCGAGCTAAGTACCATTTTAGTTAAAATATGTACCAATCTT
TAAAGACACTAAATTTCTATACTATATATAAATTGCGACAGTATCCCATTTTGTAATGAC
TGATTAAATGAGGCCACAAGAGTTAGTGACGTAATTACATAATATGGTATGTGTTATACA
CAGTAGTTTACAATTTCAAGGAAGGCCTATCTTCTTCAATTTTTAGTATTACTTGCTTTA
TGTTGCCTAACTCTAGCTAATTTTAAGATATTATGACACAAGGTATACCGTTTCGAGCAC
ACTTTTTAATTAAAAAACAACTTAGGCCACCTTCGCTCTTATGTCCTCAAATAATTTTGT
GCGTACAAATAATTTAACCGGTAAATTTACCCGTTTTCGTCGGTCATTCGACAGCGAATC
CGGCGGTCTCGAGAATAGCTTGCTTCAATTTGTCGTGCAGTTTCTGCTTGGTCGGATAGG
GAGGTAGGTCGAGGCGGTTGAAGCACGTGTGTGCTTTCGGCAGAGAATCCGGAGTCGCGT
CCGCAACCAGGTGCAGTGTGAACAGTCGCGGAGCCGCCACACCAGTTGAACCCTGTAGAG
CCCTGAATCCGGCGAGGGGCACTCGTCGCGATCCGGTGACGAACTGCAAGAGGCGAGCGC
GCATCTCCTGGTCGAATTCGTCGACGATCTCCCAGAACCACTGGGCGAGCGCGGAGTCGG
GCGCGAGGTGCTTGAGGCGCGTGTGCCGGCGCCAGTCGGTGGGGTCGAGGTCGGCGCGGC
CGG
(1143 bp)

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