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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp22034_c0_seq2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_transcription_initiation_factor_TFIID_subunit_5_[Amyelois_transitella]
Ontology
GO:0003700 F DNA-binding transcription factor activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0015629 C actin cytoskeleton
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0033276 C transcription factor TFTC complex
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0043231 C intracellular membrane-bounded organelle
GO:0044212 F transcription cis-regulatory region binding
GO:0046983 F protein dimerization activity
GO:1901796 P regulation of signal transduction by p53 class mediator
Transcript
Level		FPKM:0.63 TPM:0.50
ORF EntryO_BomoMG2592_complete:A_BomoMG_comp22034_c0_seq2
Sequence
(Nucleotide)
CTATAAACATGTTTATCGTTACGCTGCGTTAGTGTTAAAACAACAAGTTTTTAATTGTCC
ATTATTTACTAATTACTGAACAATTCAGCTTCTTGCAGAATCTCCAAGATGAGTGAGAAA
TCAACCCCACTGCTGGCTGTTTTACAGTTACTTAGAAAGTACAATCTAAAGAGTACAGAA
GACATTTTAAGAAAAGAAGCTAGTCTAGGAGACGTCGAATGTGAAAGCTTAGATCTTCCT
GAAGTAGAACTAGCGAGCATTCTTACCGCTCATCACACTGAAAGCGACCCCTTTACGTAC
GAATTGGCGTACGACGGTCTAAAAAAATTTATTGAAAATTCTTTAGATTTGTACAAGTAT
GAATTGTCCACACTATTGTATCCTGTGTTTGTTCACATGTATCTTCTGTTGATACTGTAT
GATCATGTTGAACACGCTGTCAGTTTCTTGGAAAAGTTTGGAATAGAACAAGAAGATTAC
TATCAAGAGGACTTGAAAAAGTTGTCTATTGTAAAACATAAGGATCAGATAAAAGGAAAT
GAACTAGCAGAAATATACAGCACAAATAAATTTACAGTTCAGTTATCAAGAGATGCATCT
TCACAACTGAAACGTTACTTACACGAACAGAAAAATTCCTCAGTAATAATAAATATAATA
AATAATCATATACAAATCGAAGTCCATGATGGTCCAGGAAGAACTCAAGCACAAGTTCGA
GCTACAGCTGGAGGGGTACTTGGAGAACCAATGAAAAGTGAAAATCGCACCAAAGTGTAT
TATGGGCTCCTGAAAGAGCCCGATATTCAAGTTCTACCGGCTCCGGTAGAAGACGAAGAA
GAAGTAGAAGAAACCCCTGACAAACCAAAAAAGAAAAAAGCGAAAAAAGATAATCTTTTT
ATGAAGAAACCAAAATCTGACCCAAATGCACCTCCTAATGACAGGATCCCTCTACCAGAT
CTAAAAGAAATTGATAAAGTAGAGAAAGGCAAAGCACTCAGAGAAGCATCAAAACGTGTT
CAGCTAGGACCAGACAGCTTGCCCTCTATTTGTTTCTATACATTACTGAACAGCGGACAT
ACTGCAATTAGTTGTGATATTTGTGACGATTCCACCCTTTTGGCTGTGGGATTTAATAAC
TCAAACATAAAGGTATGGACATTGACTCCCATTAAACTGCGAGGAATGAAATCTGCAGAA
AAACTACAAGATATAGACAGGGAAGCAGGTGATGTACTCGTGAGGATGATGGAGGAAAAG
GACCGTGATACGTGCCGCAACCTTTTTGGGCACTCCGGCCCCGTTTATAAAGTTGCATTT
GATCCTTTTAAAACAATGCTGCTTTCGTGCTCTGAGGATACAACTGTGAGATTGTGGTCA
CTACAGTGTTGGACGTGTCTTGTTGTGTACCGTGGACACGTATGGCCGGTCTGGGATGTG
CGCTGGTCCCCTCATGGCCACTACTTTGCTTCCAGCGGCCATGATCGTACTGCTCGACTA
TGGGCGACTGATCACCACCTTCCACTGAGGATATTTATAGGACATTATTCGGATGTAGAT
TGTATTCAGTTCCACCCGAACTCAAATTATATAGCAACTGGATCTAGCGACTGATCACCA
CCTTCCACTGAGGATATTTATAGGACATTATTCGGATGTAGATTGTATTCAGTTCCACCC
GAACTCAAATTATATAGCAACTGGATCTAGCGACAGAACAGTTCGACTGTGGGATTGTTT
AACTGGTAGTCAAGTTCGAATAATGACAGGACATAAGTCAACCATTTTCACGTTGGCCTT
TTCCGTTTGTGGAAGATGGATTGCTTCTGGTGGCAGTGGTGGAGATATGATGGTTTGGGA
TTTATCTACTGGGGGTCCAGCCGCTTCGTTACCCCCGGCACATACTGCTCCCATACACGC
CTTAGCCTTCAGTCGTGATGGAACAGTTCTATCGTCAGGCTCATTGGATTGTACAATAAA
ATTGTGGGACTTCACAGCCATAACAGACGAATCTCCCATTGAAGAAACTCTAAATAACCC
TATACCAAAAGAAGACAAATATCTATTACAATCATTTGCCACTAAAAGTTCCCCTGTAAA
AGGCTTGCATTTTACAAGACGCAATTTACTACTTGCTGTTGGCACATATGAGAGCAGTGC
TTAATTATATTTGGGTACTTGTGAAATACAAGTGACATTACATTATAAAAAATTAAAAAT
ATTAAGACAGAAACATTGACTTTATTACAACTATACTACTTGAAGAAAAAAG
(2272 bp)

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