SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp21954_c0_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		ATP-binding_cassette_transporter_subfamily_G_member_Bm3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:26.37 TPM:20.84
ORF EntryO_BomoMG2547_complete:A_BomoMG_comp21954_c0_seq1
Sequence
(Nucleotide)
ATTCACTCATCACCTTTGTCTCACCGGACGGACACACTTAAATAAATAAAGGACATTGTT
TTGAATACGCAACCCACACACACCGCCACGGCATCCATTGCTCTGTACTGTACGAAAGCA
AAACAATCGAGCGCATTTAATTAATTGGCGCGAGTATGAATGCGTGTGCAATTAATTACC
AAGCACGGACAAAGGGTGCGATAGTGCTGTGCTAAGTGTACTAGTCCAGTCAGTGCTGAG
ACGTGATCAAAGGCGCGCGCACACAGCCGCGCGACGCATTCGCCAACACTGCGTACGCGC
TTACAAACGATATTAGTTAAAATGATGCTCGCCGGAGCGCAAATCGTTGAAGACAGTGTG
TCGTACAGGCCAGAAAATGCATCGGTTTCGATAGGGGCCAACCCCGAGCCGCAGCTGACG
ACGCAAGGGTTCTCCAAGATGCCCACAAGGGATCCCGTGGACATACAGTTCACTAACATC
ACATGCACTGTACATCTGGGATTCAACAAAGGCTCGAAGCAAATTCTGCATGGTGTGAAC
GGACGACTCCGGCCTAAGCAACTGGTTGCGATCATGGGTCCCTCCGGTGCTGGTAAATCG
ACACTTCTGGATGTTCTATCCGGATATCGTATCACGGGCGTCGGCGGTGTTGTCCACGTG
AACGGAAGAGGCAGGAACATGAAAAGATTCAAGAAGATGTCGTGTTACATACAGCAAGAC
GACCGCCTGCAGGGACTACTGACTGTCTCAGAGAACATGGTATTGGCTTCCGATCTTAAG
CTCTCCATCAAAATGGACAAATACGAAAAAGGAGAAGTGATCGAAGACATATTAACTGCA
CTGGGTCTGTACGAGCATATGAGCACGCGTGCGTCCCGCCTCTCGGGTGGACAGAAGAAG
AGGCTCTCCATCGCTCTGGAGCTGATCAACAATCCCCTCGTTATGTTCCTCGACGAACCA
ACAACTGGTCTGGACAGCTCCTCGTGTAGTCAAGTAGTCAAGCTCTGCAGGGATCTGGCG
CAGCAGGGTCGTACCATAGTCTGTACGGTACATCAACCCTCAGCGTCACTGTTTGCCCTA
TTCGATCAAGTATACGTTTTAGCTGCAGGAAATTGCCTCTACCAGGGCACCACAAAGAAC
TTAGTACCATACTTGGAGGGGGCCGGAGTACCGTGCCCTATATACCACAATCCAGCTGAT
TACATTATCGAATTGGCTTGCGGAGAATACGGTGAAGACAAGATCCAAATCCTAACGACA
AAAGCTGAAAACGGACGAGCACTTTCCTGGTTCGACGATCCTGACTCCATGCCCACTATG
GAAGTCTTAAGAAAGCAGTGTCCTCTTAGCGTCTTAAAGGAGCAAGACCCTAGTACTGGC
AACGAAGAAACTCCTAGATCCAATCAAAGAAAAGTACTTATTAAAAGAGGATTCTTAAAA
GCAAAACGCGACTCCACAATGACCCATCTCCGGCTAATAGTGAACGTGTTAGTGGGAGTT
ATGTTGGGGAGTTTATTTATCAAGGCCGGTAACGAAGGCTCCAGAGTCTTGGAGAACTAC
AATCTGCTGTTTGCGATACTAATGCACCACATGATGTCGCCAATGATGCTTACCATACTC
ACTTTTCCGTCGGAAATGTCCATATTATCAAAGGAGCACTTCAATAGATGGTACTCGTTG
GGTTCCTATTACATCTCTATTACAATTGTCGATTTACCTATTACGATAGTATCTTGTGCG
GTGTTCAGTGCGATAGTGTACACTATGTCTGGTCAGCCGATGGCGATCTCTCGGTTCGGG
ATGTTCTTCGCGATCTCCCTATACACGGTACTAGTGGCGCAGAGTTTCGGCCTCATGATC
GGAGCCGTCTTCAACGTTGTTAACGGTACTTTCCTTGGCCCTACTTTGTCGGTACCGATG
ATGATGTTCGCGGGTTTCGGAGTGACTCTACGCGACCTCCCGCCGTACTTGTACTGGGGG
TCATACGTCTCGTACTTGCGGTACGGATTGGAAGGATTCGTGGGCGCCATATACGGGTTG
GAAAGACCGAAACTGGACTGCAATGAAGCACCTATATGCCTTTATAAATACCCAAGACAG
TTCCTCTCTGAAGTAGCTATGTCTCCGGACAGATTCTGGTGGGACGTTCTAGCGCTCACG
ATCTTCGTCTTCGTGTTAAGGATTGCAGCTTTCTTCCTCCTAAAATGGAAGTTAAACGCT
GTCCGATAAAGACATCTAATTTGCTCAAGCCATTTATATATACTTAGAATTATAGTAGGT
AGATTAATAATGTGTTTTTTTTTTTGGCGAAAATCGTATTTTAAACGGGAATTTAAGTTT
ACTACGGTTGGTGACAAAAACAAAATTAATGTTAAATGTAAAAAAAATTAATGTTAAATT
CATAAAGAAAATTTTAAGTAAGTAGGTATTAAATTAATTATTGCAACGGTTTCTAGGTTT
TCTTACTTGTACGAACTTGTACAAAGTAAATTATATTTTAGTGATTTCTGTTTTTCTAAC
CGTATTTTGAGGGTAGGTATTTTAATTTTGTTGACCTGATTTTTTATCTGGTCTGTGGTT
GAACTAGATAAAATTAAATTAAAATGAGTGCCATTTTACTGAGTCATTTTTATTATATGT
ATAAAATATTAAATACAAGGTGTTATTATATCAAATATAAGTTATCATTTAATAGTAATC
GGATTGATGGTTGATTATAGCTATATGAAAGAAATATTAACAAGGAAACGATAAGAAAAC
GCAGCGAAAAGAATATTTGAGTCGTCTATTATCAAA
(2796 bp)

- SilkBase 1999-2023 -