SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp21862_c0_seq2
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0017022 F myosin binding
GO:0022008 P neurogenesis
Transcript
Level		FPKM:4.28 TPM:3.38
ORF EntryO_BomoMG2471_5prime_partial:A_BomoMG_comp21862_c0_seq2
Sequence
(Nucleotide)
GCCCCCGCTCGTGCGCGCCGCCCCGCACCGCGACCTCAGCGGACTGTTCGCGCCAGACCT
CGCCGAGCCCGGCCACCAGGTCAAAGGTGAGTTCACCGGTAAGCTGAAGGAGAACGTGAA
GAAGGAGGCCTTCAAGCCCGGCGTGGTCTATGAGCTGAACGACGAAGACGAGATGCTGTA
CGGAGGCGACCAGACACCTGCATCCATGGCCAGCATAATGCTGGCGGAGCAAAGCAAGAA
TCCAGGGGTTCCGCGTCGGATGTCGCGCTGGTGGAAGAAGTACCTGCAGGAGGTGAAGCC
CACGTACTGGCTGTTCTGCGTTCGCGACAACGGCAACCTGGAGATATACTCGTTGCCGGA
AATGAGGTTGAGTTTCCTGGTGAGAGACTCGTGCGCTGGAAACAGGATATTGGCGGACAG
CCTGGAGTCCGTCCCGATGTCAGACAGCATGGAGGACGAGGACATCAGCGCGCCGTCACA
CAACGCTGATGCTGAGAAGCTCAAGGAACTGTGCGTCGTCGGTCTGGGGCACAAGGGTTC
CAGGGTGATACTGATGCTGAGGATGCAAAATGAATTGATGATTTATCAGGCGTACAAATA
CCCCCGGGGGAATCTCAAGCTGCGGTTCTGCCGGGTGACTGTCTCGTTCCCGTTTGGGTA
CGAGAGCGTGCCCAGCACCGCACAGAGCGCCGACACCTACGAGACGGCCGGCGTGCGGGA
CGGGGTGCGGCAGCTGCGGTACTTTGGCAACGTGGGCGGGTACAGCGGCGTGTTCGTCTG
CGGCGCGACCCCCTACATGATGTTCTTGTCTGCGCGCGGCGAGCTGCGCCTGCACCCGCT
GCACGCCGACCGACCGCCCGTGCACACGTTCGCGCCCTTCAACAACACCAATTGTCCGCA
GGGCTTCCTGTACTTTAACGCCGAGTCGTCGCTCCGCATCTGCGCGCTGCCGTCGCACCT
GTCGTACGACGCGGCGTGGGCGGTGCGCAAGGTGCCCATCCGCATGACGCCGCACTACGT
CACGTTCCACCTGGAGTCCAGGACCTACTGCCTCGTGGCCTCCACCTCGCAGCCCACCAC
GGTCTACTACAAGTTCAACGGCGAGGACAAGGAGAAGTCTGCCGAGAACAAAGGGGACAG
GTTCCCGTACCCGATGCTGGATCGCTTCTCGGTGATGCTGTTCTCCCCCGTCTCCTGGGA
GATCATACCGAACACCAAGATCGAGCTGGACGAGTGGGAGCACGTGACGTGTCTCAAGAA
CGTGTCGCTGTCGTACGAAGGAACCAGATCCGGTCTCCGCGGTTACATAGCGATAGGAAC
TAATTATAATTACAGCGAGGATATCACTTCTAGGGGGCGGATAATAATCTACGACATAAT
CGACGTGGTCCCGGAGCCCGGGCAGCCGCTGACCAAGAACCGGTTCAAGGAGATCTACTC
CAAGGAGCAGAAGGGTCCGGTGACCGCGCTCACGCAGGTGCTCGGCTACCTCATATCCGC
CGTCGGACAGAAGATATACATATGGCAGCTGAAGGACAACGACCTAGTGGGCGTCGCGTT
CATCGACACCCAGATATACGTGCACCGCATGCTGGCCGTCAAGAACCTCATCCTGGTGGC
CGACGTCTACAAGTCCATCTCGCTGCTGCGCTACCAGCCCGCGCACAGGACGCTCTCGCT
GGTCTCCAGGGACTTCAGGACCGCGCAGATATACGATATGGAGTTCATGGTGGATAATAC
GAATCTCGGTTTCCTGGTCAGCGAAGCCGAGGGGAACTTCGCGCTGTTCATGTACCAGCC
GCAGGCCAGGGAGAGCTACGGAGGCCAGCGGCTGATACGCAAGAGCGACTACCACCTGGG
CCAGCAGGTGCACGCCATGTTCCGCATCAACGTGCGCTCGCTGCCAGACTCCGACAACTC
GCACAAGCGACACGTCAGCATGTTCACGACCCTGGACGGCGCCATAGGCTACGTGCTGCC
GGTCACGGAGAAGATGTACCGGCGCCTACTGATGTTGCAGAACGTCATGAACAACTACTA
CTGCCACATAGCCGGCCTCAACCCGAGGGCCTTTCGCACGTACAAGGCGTCGCGGCGCGC
GGCGGGGGGCGGGGCGGCGCGGGGCGTGCTGGACGGGGACCTGGTGGCGCTGTACGCCGC
CATGCCGCGCGCCGACCAGCACGACATCGCAAAGAAAATCGGTACAAAAGTCGAGGAGAT
AATGTCGGACTTGTACGAGATAGACAGACTGACCGCGCATTTTTAGTTTCTTAATATATA
TGTATATGTTTTAATTTAGGCAGCGGCTTGGTTCTGTTCCTAACATTGCTGATGTCCATG
GGCAACAGTAACCACTCACCATCGGTTGGGCCGTAAGCTCGTCTGCCTACAAGGGCAAT
(2399 bp)

- SilkBase 1999-2023 -