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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp21723_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_DIS3-like_exonuclease_2_[Amyelois_transitella]
Ontology
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000287 F magnesium ion binding
GO:0000291 P nuclear-transcribed mRNA catabolic process, exonucleolytic
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004540 F ribonuclease activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006364 P rRNA processing
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008266 F poly(U) RNA binding
GO:0008285 P negative regulation of cell population proliferation
GO:0010587 P miRNA catabolic process
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0019827 P stem cell population maintenance
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051306 P mitotic sister chromatid separation
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
GO:1990074 P polyuridylation-dependent mRNA catabolic process
Transcript
Level		FPKM:3.08 TPM:2.43
ORF EntryO_BomoMG2364_5prime_partial:A_BomoMG_comp21723_c0_seq1
Sequence
(Nucleotide)
TAATCATTCACATTTATAGACAAAAGCAGCAGGCTTGTAATACTCCATACCTGCTTATAA
GTATTTTACAGTTTTTATTTTTTTGCGCCATGTCAAGCCATAACTCATTAAGAATGGATG
CAGCATGCAGTGAACCAACAACATCGGTGGTCTCCACGTCGTCAGTACCACAAAAAACAT
CAAGTGACAAAGCAATAAATGAAAACAAAGTCGATTCACCTAAACGAACACCCAAAAAAT
CAAAAAAAAAACAAAGATCAGAAGTTACAGTACCTACCATGGTATTCAACAATTCATCAA
TTAACGATGTTTCCAATAAGTGCCAGAATTTGCAAATTGAAAGCGACAGTGATAACGGGG
AGACAGAACAGGTAACCCCAACTACCCCGTCGAAAGGAAAAAACGCCAAGAAAAAGGAAC
GACTAAAAAAGTTGGAAATACCTACGGTACCAGTGAATAACTTTAACAACACAAACAGAG
TACAAAATTCACAGTATTTATTTAACTATTTTGGGTCTCCTAGAAATAGTACATTCTCTG
TGCATGAATATTTTACCCAACAGATTACACCATTGTATGCAAGTACCAGCTCTAGGTATT
TAGAAAATCTGTGTCACCATCCACAATATCAATATATGCAGAATATCCAACACATGAGAG
ATATTTTACAAAGCCCAGAGCATGTTGCTAGTGTACCTATCACTCCATTAATATTATCAG
GACAGAGATCAGAACCTGTTTGTATTCCAAATTCTACATTTATTCATTCTGAACCTAGCA
CTCCAAGGTTCATAGAGAATGCATTGCAACACCCCTTATTGAATCCATCATTTTCAAGAC
AAACTGGTACAATACAAATTGGACAGCTCAGACTGAGGCATAATTCAGAAAACAATTGCT
TAACTAAAACTCTTGTAAATGGTGACAAGAAATTTGATGCATACCTTTCTGGAGAAGATG
TTGAGAAAGGTTTAAAGAACAATATGCTTATTGAAGGTGTTCTGAGGATAAATCCAAAAC
AATATCAACATTCATATGTTTCAAGTCAAGACCGGAGTCAACAAGATATATTAATAGACG
GTATTAAGAATAGAAATCGTGCAATGGAAGGAGATGTAGTAATAGTACAATTAGTTGAAA
ATGAACCTGAAGAAAACGTTACTAATCCTGAACAAAAAAGAGGGAAAGTAGTTTTTATCA
AGGAAAAAGTTCATACTAGAACTTGTATTGGTTCACTCAAACTAATGCATGACAAAAATA
GACAAAAAGCTATGTTCGTGCCTCGAGATCACAGAGTACCAAGAATAAATATACCATTTA
CTTCATGGCCAGATAATTTTTATGAAGATGCCAAGAAATATGAAAACACATTGTTTGTTG
CAAAAATAATAGATTGGTCTGATACAAGGTTTGCTGTAGGAAAAATTATGGGTAATATTG
GTAAATCAGGAGACATGGTCACTGAAACAAAAGCAATATTAGCAGAAAATGATTTAGATG
TTACTGCTTTTGGCTCTGAATACAAGGATTTGTATCCTCAACTTGACTTTACAATTCCCG
ATGAAGAAATAGCAAAGAGAGAAGACTGTCGGATGTTATGTATCTTTAGTATTGATCCAT
TTAATTGCCGTGATATTGATGATGCAGTCTCTTGCAAGGAACTAGAAAATGGTAATTATG
AGATCGGAGTCCATATTTCTGATGTTACATATTTTTTAAATGAAAACACTCCGCTTGATG
TGAAAGTTGCAGAAAAAGCTACAACAATATATTTGGTAGAAACTGCTTACCACATGCTTC
CAGATGATTTGTGTATGCTTTGTTCTCTATTCCCTGGTGTAGATAAACTAGCTTTCTCTG
TTTTTTGGGAAATGACCAAGGATGCTAAAGTTATTAGTTACAGGTTTGCTAGGACTGTTA
TAAATTCATGCTGTCAGTTGGCATATGAACATGCTCAAGATGTTCTTGATGACAAAGAGG
ATGCTCAAATAAAATTTCCAGAAATGTACAATGGTTTTGATTACAAAGATGTGCACAAAT
CAATAAAAATTTTAGGCAAATTGTCAAATATTCTTCGTGCAAATAGATTTGAGAATGGTG
CATTGAGAATTGATCAACCTAAGGCTAGTTTTAGATTAAATCCTACTAGTGGTTTACCAG
AGTCATACTGCATATATGAGAGTAAAGAAAGCCATCAACTCATTGAGGAATTCATGTTGC
TCGCTAACATGTCTGTAGCTACACGTATTTATAGTGACCACCCAAAACTGGCATTTTTAA
GGAGTCATCCACCACCAAGTAAATATATGTTGATGCAGCTAGAAAAGTCTCTAAAACCAA
TGGGCATAAAATTAGATATCGAATCGGCTGGACATCTACACAGATCTTTACTACCATATG
TGGGACCAGACAATACAGACAAAGGAAGAGCCATGGTTTTAAATTTGCTATGTGCAAAAC
CTATGACAAGAGCAAAATATTTTTGTGCTGCTGCTTGTGATGATGATGAATTTCAACATT
ATGCTCTGAATGTGCCCCTGTACACTCATTTCACAAGTCCTATTAGGAGATATGCTGACA
TTATGGTTCATAGGCTATTAGCAGCAAGCTTAAATTATAGAGAAACTCCAGCATGGCAGG
AAGATGATGTACGCATGATAGCTGCTCAATGTAACAAACAGAAGTACAATGCTAAAAAGG
CTGGTGAAATGTCAACAGAATTGTACACTTTAAAGTACATTGAACTTAATTCTCCCATAG
TCACTGAAGGTGCTGTGGTTGACATTAGGGAGAAATATATTGATGTTATCATTGTTTCCA
TGGGCCTGAACCGGAGAATATTTTTCAATAATGATTTTCCTGGAGAGTATAAGTGTATTA
GACACGAAGAACTTGCGAAGTTGGCTCGAATGGAACTGAAATGGAAACCGGTGAATGAAT
TGCCAGAAACTAAACAAGTAATTGGAGTTTTTTCCATTGTACAAGTTGAAATGCACAAAG
GCGATGACATGGTAAAAATCGAAACTAAATTAGTGCGACCCCAATAGTTTACATTATATT
ATTTTACTGGTTTTTTTATGACGACGACAACCAGACGAGGGTCTTCAAAATTTCCATTCG
AAACCTGAATTTTTTGTAATGTTACAATTTGTAACAGTAATTCTATTTCTAGAAATTAAG
AGAGTTTAATCCGAAATCTTAATTTATTTTTATAAATGAAGTGATTTTAATGAAATTTAG
TGTTAAATGAAATCGTTCCTTTCGAAAGCTCTTTACTCTAGA
(3282 bp)

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