SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp21297_c0_seq1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_TM129-like_[Amyelois_transitella]
Ontology
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.89 TPM:2.28
ORF EntryO_BomoMG2099_3prime_partial:A_BomoMG_comp21297_c0_seq1
Sequence
(Nucleotide)
ATCAATTTTTTAATCAATAGATACAAAAAAAATCAGAATGGATGTTTTAGTTACACTTTT
CTACGTTCTATTCTCTATATGCGTTGTTTATCCGCCTACCGAGTTCGTGTCTGCAGGATT
CACAATTGCTCAGCTATTTGATAACTACTTGGGCTCTGAAAATACCAACTTTATTGGTTA
TCACATGAAGAGAATAACCATAACTGCGTTTATACATTCCGCTCTACCTCTTGGGTACGT
TTGCACACTATGGTGTTGCGGGGAACGTAGTCAATGGATGCTTGCAAGTTTTGCTGCGAC
GGCCTTCATACCGCTGTTAATGTGCTACAAATTGCTGTGCTGGTGGGAGTATGAGAAGCT
TGGTCATCCGATCGTAAAGGCACTCCTGCCGTACGTGTCGACGGGAAGTGACTGGCGGGT
CACTGCGGCTTATCTCAATTCAGAATTTAGAGGTGTTGATAAAGTCTCAATACAGCTGAC
GGCTACAAGCAAGTTTGTGGCTACGGAGACTTGGCTCATCAAGGTGTCACAGTATTCCGT
TAACATAGTGAAACAGGAAGATTGCTCTCTTGTTGCCACTGCTAGTGACAGCCACAATTT
GTCACCATCGGGTGAAGACGTAATCCAATATCTGAACATAGAGGTGATACCCAACCGAGA
TGAGATCCAGCGATTTACATTTCGCATCACAACAGTAATGTTGCGTGACTTGCAGCCGAG
GCTATTGAATGCAGTGAGGGTTCCTGAACACATTTCATTGATGCCAACTTTAGTGGAACG
ATTCGTGAATGTCTTCAAACAGTATGTTGATCAGAACCCTGTTTATATTATTGATGAGGA
GCCAGAGATGTGCATTGGGTGCATGCAAGCCCCGGCTGATGTTAAGATAAATCGACGTTG
CTTGCCGCCTCCACCACATCTCGAGGGAGGACCACAGCAGTGCCAGCAGTGTCACTGCAG
GGTGCTGTGGTGCGCGTCGTGCATGGGGCGGTGGTGGGCGACGCGCGCGGGCGGGCCGGC
GTCGGGCTGGCTGG
(1034 bp)

- SilkBase 1999-2023 -