SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp21099_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743043_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008285 P negative regulation of cell population proliferation
GO:0021915 P neural tube development
GO:0030154 P cell differentiation
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045335 C phagocytic vesicle
GO:0061734 P parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1903599 P positive regulation of autophagy of mitochondrion
GO:2000785 P regulation of autophagosome assembly
Transcript
Level		FPKM:2.89 TPM:2.28
ORF EntryO_BomoMG1975_internal:A_BomoMG_comp21099_c0_seq1
Sequence
(Nucleotide)
GAAAATTAGAAGCTGCGACCTACCAGGATATCCAAGGTCAACTTTTTTGATGGTTTTCAG
TCCTGATGGGACAAAAGTTGCATCAACCCATGGCAATCATAATGTGTATGTGTCTGATTT
GGCTAGTGGAAAACACCTTAAGATTCTAGAGGGACACCCAAGAACACCATGGTGTATAGC
ATTTCACCCGTCACATACACAGCTTATTGGCTCTGGGTGTCTTGGTGGTCAAGTAAGAGT
TTGGGATATGGGAAGTGGTGGAAGTGAAGTGTGGAATGTTCGCTATGAAACAGTGATAGC
TTCTATTGCATTTCACCCTCGTGAACAATTACTAGTAATTGCTACTTACAATGAACTATA
CTTTTGGGATTGGAGTCATCCAGCACCATTCACCAAAGTTACCACTAATAATATAAATGA
AAAAGTGAGATATGTTGCGTTCGATGCTCTTGGTTACAAATTAATAACTGGAATATCTGT
ATCGGGTTGTCCGAGTATGTCTAGTACTTCATTGCTGCAGCAAAGTCCGACAACAGGCAC
TTCTAACACACAAAATAGCAGTTCTAATAGACGGAACGCCACAGGCAATGCCAATGAAAA
CCCGCTTGGGATCAATCCCCCAACGGACAATGCTGGTTCAGCACAAGACATGATTGTAAA
TTCATACCAGAACCTGGTACAAAGATATGACAGTCTAGTAAGGAATTATCAAAGGCTTTT
CATGGTACGGCATCGGCTTTCCAATTCTTCTCAATCAACTCCAAATACGATTGATCGAGG
AACTGATCCTATGGAAACCGATACATCCCCTGGAACGTCCGGCTGGAGCAGACCTGCACG
ACCGTCTACAGTTACAACAAACGCTGAGGATGGGGCCAGTACCAGCGGAACGAGACGTCC
AGACAGTGGTGAAAGCGGGGATGGAGAAAACAGTAGTCGCTTACTCAATTTAGATGCTTT
AACGTTTGACAGTGATCCATCAAGGAATCAAGATTCAGTTTCTGAGCGTTCTCCATTTGG
GTCCCGTTCTTCAGCTTTCCAACCGTTAAATGAAACCGGCAGAACATTTAGACCATCCGA
CCCGAACGAGCGCTCTACAAGATTATTACCCAACCCCTTTTCGTCACCCGGAGGCATCTC
GCGATCGGCCCGAGTTAACTTCGGTGAAATGTCCACATCTGGCGACAACGACCCGGCGAA
CGCGTCGCGCACCAGCATCTTTACCTCGTCGAGAATGAGTTCCACGGCTGGCCGAGTATT
AATCTCGCACAGACGGAATTTCTCGCCGATACGACGCGGGCGGATCTCGCTATGGGGTGA
CTCGCCGACTTCCACCGAGAGCACTCCTACACCCTCTCCTCGAAATATTACGAATTCTTC
CGCAAACGAAGAAACGCAGGATACTACCGCACCACGCAGACCTACTATGACTAATTCTTC
GACGCAAATGAGTCCCGTACCACCCCTGGACGCGGAGGCCCTCAACGAGAGCTTGGATCT
GATTCGGGACATCTTGCGCGATTCCGGAACGAGGCTTTTAAATTTGATTACGGACATGTC
GTTGTCGATGGTATCTGCCAGCGAACGGGAGCGACGACGTCGCGCTCACTCTGACGAAGG
CTCGCCCGTAGAGCGCCGTCCGCGGCCCCGG
(1651 bp)

- SilkBase 1999-2023 -