SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp20964_c0_seq1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_39S_ribosomal_protein_L39,_mitochondrial_[Amyelois_transitella]
Ontology
GO:0000002 P mitochondrial genome maintenance
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0004827 F proline-tRNA ligase activity
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006433 P prolyl-tRNA aminoacylation
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0030529 C ribonucleoprotein complex
GO:0031047 P gene silencing by RNA
Transcript
Level		FPKM:3.79 TPM:2.99
ORF EntryO_BomoMG1892_complete:A_BomoMG_comp20964_c0_seq1
Sequence
(Nucleotide)
AAAAACCTTTATTTACAACAAAACAAAACAATAAATGAAAATGAAACGGCACGTTACTTG
TTTGATGAAAAAACTAACAGAAAAAAGCCATTTTTCCACTCTACAAATAACAAGATTTTT
AAGCACACAAGAGGCGATAGAACGTCGCAGCTATTTGTTCACGTTAGAAAAGAAACGGCA
GATAGAAAATGTCGGTAGGATCGAAAAAATCGAAGTCCAATACAAAGGCATACCAAAAGA
CTGCACCTTGGTAATGAATAAAAACATTTCGACACCGTACGACTGTGCTAGACATCTAAG
TGAATGGCACATGGAGAGCAGTGTCCTAGCTTTACTTGATGGAAATCTACATTGGGACAT
GCACAGACCACTGACTGAAAGCTGTACGCTTGAGTTTCAAAACTACAAAGCAGCAGAACC
ACAGCAAGTAAACAAGGCATTCTGGCGCACATGCTCGCTGATGCTTGGAGCGTGCGCTAC
CGTTGCATTCAAGGACACAGTTCCAGTACACCTACACAGTTTTCCACTGCCCGACATAAG
AAGCGGTTCTTTCATCTATGATGTCGATCTTCCCACTCTAAGTGATTGGCAGCCAACTCA
CCAAGAGGTTTTGACCCTCGCTGCTGAGTATGTGAAACTGTGTCGGAAAGCTGTTCCTCT
AGAAAGGCTGGAAGTAGGAGAGGAGCTCGCTTTGGAAATGTTTGTGGACAACGAGCACAA
GAGCAAACAGATACCAAATATTGCTAAGACTAACGGTAAAGTGATATTGTACAGAGCCGG
GAACCACGTTGATATATCTAGAGGACCTCTCATCAGCAATACCGCGCAGATAGGCCGGCT
GGCAGTCACCGCTGTCCACAAACTTACAGGACCAACGGAAGATGGTGTGAGCCAGTTGTA
TCGTTTCCAAGGAGTAGCCTTACCGAAAGGAGTTGTACTGGACCACTTCGCTTTCTCGAT
ATTAATGGACAGAGCCAAAAAGTTGAATCCAGCCAGATCGCCTTTTTTGAAAAAAGAGGA
TCCTGAAATTAACGAACAAATAGAAAATGTCGCAGCGCAGGCGTAGGATACAGTTAGTTG
TATAAATAGCTTTGTAGTTAATGTAAG
(1107 bp)

- SilkBase 1999-2023 -