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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp20756_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_transformation/transcription_domain-associated_protein_[Bombyx_mori]
Ontology
GO:0000125 C SAGA complex
GO:0000812 C Swr1 complex
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005794 C Golgi apparatus
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016578 P histone deubiquitination
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030914 C SAGA complex
GO:0033276 C transcription factor TFTC complex
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:1904837 P beta-catenin-TCF complex assembly
Transcript
Level		FPKM:2.83 TPM:2.24
ORF EntryO_BomoMG1777_internal:A_BomoMG_comp20756_c0_seq1
Sequence
(Nucleotide)
CGCCGCCTCCGCGTGCCGCTCCACGCCGCCCAGCTGCTCGGCGCCGCCCGCGCATATGCA
CAGGTACCCGCGGTACAGGTTTACTACCCACGCCAATTCCTTAGGGCAATTGTATTCGAC
TTCAGCTAAAGCTTCTTTCATTGTAGTCCAGTTAGGGTTACGCCATGAACTTTCCAGAAT
CAAGAATGGATCGCGACCGCTTCTGCTTAGTCCTAACTCAAGTAAAGAGTCCCATTGGTT
TAACTCTTTGGCACACTTCAGCCAATGTTGGGTCCAAATAGTGCACTCTTTGTGCATGCT
GTAAGAGGATGGGTTTGTCGCATAGTCTTGTTTCAGCTTGGCCATAGCGACGTCGTATGC
AGCTTGAGCTTGTTCGAAGAAGCCTTGTTGTTCATAGGCGATTGCGATATTAGTTTCGCG
GTACCTTGAATGCTTCTGCCAAAGACCAGACCACATATCCTCTTCTTGTAATAACTCATA
CATATCGCTGAGTGAATCTAAAATTTCAGTCGGCGTCGTCACTTCTACGTCGTAATCATA
TATTTCTGCTTGGTCCCTTTGAACCCGCCCGCCGGCCTGCTCGATGGCCATCTGCTCGAG
ATTCAGTGTCATACGATGCCAGAGGTTGTGCGTTTTTCCCAAATACTTCATCATAGGGGG
TTTGATGCTGATGGGAGGATTACATCGAGCGAGGGATTCTATGAACGTGTTGAGGGCGCT
GACGGGCTGATCGCGTTGAATCACGTGCACGCCAGATATGATGAAAGGAACAACCTCGTT
GATCAGCGTCGTGAGCTGTCGTTCGTCGAGCGTGGCCCAGAGCGCGGGCAGCAGGGCGAG
CCACACGTGGTGCGCGAGCGTGTCGTCCATGTGGCAGAGCTGCGCGGAGGCCGCCAGCAG
CTGCTCGGCGCGGACGCGACGCGCCAGTTCCAGGAACTCCGATTGCTTTGCCACTATCTG
GTTTAGCGATCGCTGTCTGTTTGGAACATTCTTAGTGAAATCTTCTTTATGAGTGGAACT
CGCGTCTAAATCCATATCCAGCACGTCCTCCTTGTCGGGATCGAGGGAATCGCTAAATCC
GTCGGATGATTCTTCTTTAACGCTGCTAAAGATGATGAATGACTTTCGGTCCTCGCTATC
CGCTTGATTGATGACCGATGATATGCTCGGCAACAAGTATTTTGGATTCGATAGACGAAT
TTGAGTGCTGGGCGCACAGGTGACCAATAGCAGTTCGAGGCACTGTTTAATCCAGAAGTG
TTGTCCTATGTGCTCCCAGTTCTGCGAGCACACGACGTACAGCAGGCGGTCGAACACGCG
CCGCCGCACGCTCTGGTCGTACACCTCAAAGAACTTGGCGCGGATCTGTGGCTGCGGGCA
ACGGAGACCCGCCAGGAAAGCGGGCTCCAACTTCATGGATAGTTCCGTCACCTTCAGCTG
TTCATCCCGATACACGTAGTTGATCAGTTCTAAAAATTGAGCATTGAGCTCGAGGTCGTC
AGGGAAACGTTTCTCGACATATTGCATTAGTTTCACGAGCAGTATTGACTTTTCGCGCAG
GGAAGGTACGGCCCCGCTGCTAGTGGTCGCGCCGCGGTGCATCACCCACTCCTCAACCAT
ACGAATGATCGCTTTCATTACCTTAGAATCTGTAGTCTTTTCGATAAGACCAACTAGAAC
AGTTCCTATGAAGGTTTTTTTCGTATCGCCCGGCATCACGGAAACGCGAGCCTTTAGCAA
GTCTAAGGCCAATATCAACAAATCGGATATGGCTGCATCGGGGTTGGTGGCGACGTGGTC
CCTAGCCATGCGCTGCAGGACGCGCATGAGCGGGAGCAGCAGGCGGTCGATGTAGGCGGG
GCTGGAGGAGCAGCACGCCTTCAGCATCATGAGCGGCCCCAGCAGCGCGCCCGCGCCCGA
CGTGCCGCCCGTGCCGCTGCCCGCCGTCTTCTCGTACGCCGCCAGACCCTCGAACGCGTA
CTTGCTCACGCACGCGTATAGTGTTTCGAGCTCCTCGTACTTAGAAGCTTGCGCGGCCCC
CGTGGGCTCCGTAGGGAAGATGGCGGTAAGCTTGGCGAGCAAGTTGTGCGTCAGTCGCAC
GATTTTGGCATTAGTGGACGCGACGCAGGCGGCCAGCCCGCGCTGCAGCGGCTTCAGCGC
CGCCAGGATCTGATCTCGACGCAGCACGCCCAGCAGGAACACCAGCAGCTCGAGCGCCGT
GCAGGCATTGGCGCATGATGCCGCGTTTGTCTCTGCACTTGAGAAAACTTTATCAAGCCA
GGCAAGCTTAGGCTCGCAGAGGTGTGGCCAAACGTCGGGTTTGAGAGCAGTCTTAAGAAG
AAGAACGCATCTTCGCGATAGCTGCTCTCCTGCGGTCGCACCTCCGCTTCCGGAAACGGT
ACCCTCGTTCATCGTTTGGCACACCTGGCAAGCCAGTCGCAGTAGCAGGTTGACAACGAC
ATCTACGTGTTGTCTGTCGAGCGGCTTGGCGGCGTCGGGCTCGAGCCTGGAGGCGCTGGC
CTGCGGGCTCGCCCAGCCCGTGTTCAACGCCTTGCGACCCTCCGAGCTCGCGTCATCGGA
CGACACGCGCTTCATGGCGCCGCCCGGAGATGTCGCCACGATGTTGTCGTCGG
(2633 bp)

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