SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp20579_c0_seq1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		26S_protease_regulatory_subunit_6A_[Danaus_plexippus]
Ontology
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0000502 C proteasome complex
GO:0000932 C P-body
GO:0001824 P blastocyst development
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006521 P regulation of cellular amino acid metabolic process
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0017025 F TBP-class protein binding
GO:0022624 C proteasome accessory complex
GO:0030163 P protein catabolic process
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0031595 C nuclear proteasome complex
GO:0031597 C cytosolic proteasome complex
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0036402 F proteasome-activating activity
GO:0038061 P NIK/NF-kappaB signaling
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043488 P regulation of mRNA stability
GO:0045899 P positive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:0050852 P T cell receptor signaling pathway
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:1901800 P positive regulation of proteasomal protein catabolic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
Transcript
Level		FPKM:35.76 TPM:28.25
ORF EntryO_BomoMG1669_5prime_partial:A_BomoMG_comp20579_c0_seq1
Sequence
(Nucleotide)
ATTCATTTTAGAGTCGTCAAATGTGTATGGGTTCAAGAACTTCTTAATTTAAAAGATTAC
TACGAAAAAACAAATCATAATATTACAATGGCCACAACATTAGAAGACAAGTCAATTTGG
GAGGATGGCGAGGAAGCTCTCAGTGAGGAAGTTCTTCGCATGCCAACTGATGAAATCGTA
AGTCGAACCCGACTTTTGGACAATGAAATCAAAATAATGAAGAGCGAAGTGATGAGGATC
TCGCACGAGCTGCAGGCTCAAAACGATAAAATTAAAGAAAACACGGAGAAAATCAAGGTC
AATAAGACGCTACCATATCTCGTATCGAACGTCATTGAACTTTTAGATGTGGATCCGCAA
GAGGAGGAAGAAGACGGCGCCGTTGTCGATCTAGACTCACAGCGTAAAGGGAAATGCGCT
GTAATCAAGACTTCAACCCGGCAAACATATTTCTTGCCCGTCATCGGCTTGGTAGATGCA
GAGAAACTCAAACCAGGAGACTTGGTAGGAGTCAACAAAGACTCTTATTTGATCTTAGAA
ACGCTCCCAGCGGAGTATGACGCCAGAGTAAAGGCAATGGAGGTAGATGAGAGACCAACT
GAACAATACTCAGATATTGGAGGTCTGGATAAACAGATACAGGAATTAATTGAAGCTGTA
GTGTTGCCAATGACACACAAGGAGAAATTTGTGAATCTCGGCATCCACCCACCCAAAGGA
GTTCTTTTATATGGACCTCCTGGTACAGGGAAGACATTGCTGGCGAGAGCTTGCGCTGCT
CAAACAAAGTCTACATTTTTGAAGCTGGCTGGTCCACAACTTGTGCAGATGTTCATTGGT
GATGGTGCCAAGCTTGTCCGCGACGCCTTTGCATTGGCTAAAGAGAAGGCACCAGCAATC
ATCTTCATTGATGAACTGGACGCTATTGGTACAAAGCGTTTTGATTCAGAAAAGGCTGGA
GACCGTGAGGTGCAGCGTACTATGTTGGAGTTGTTAAACCAGCTTGATGGGTTTAGCTCA
ACTGCTGACATCAAGGTCATTGCAGCTACCAATAGAGTGGACATTTTGGACCCTGCCCTG
CTCAGATCTGGACGTTTGGACCGAAAAATCGAATTTCCTCATCCCAATGAAGAAGCCCGA
GCCAGAATTATGCAGATCCATTCCCGTAAAATGAATGTAAGTCCAGACGTTAATTTCGAA
GAACTGTCGCGTTCGACTGATGATTTCAATGGCGCCCAGTGCAAGGCGGTCTGCGTCGAA
GCTGGTATGATAGCGCTGCGACGTTCAGCAACTGCCGTCACTCACGAAGACTTTATGGAC
GCCATACTGGAGGTCCAGGCTAAGAAAAAGGCCAACCTTAGCTATTATGCTTAGTTGTAT
TAAATATAAATAATTTGTATAAATAAAAATTTACTTCAAAAAAAAAA
(1427 bp)

- SilkBase 1999-2023 -