SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp20546_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_collagenase-like_[Papilio_machaon]
Ontology
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
Transcript
Level		FPKM:249.36 TPM:197.02
ORF EntryO_BomoMG1645_complete:A_BomoMG_comp20546_c0_seq1
Sequence
(Nucleotide)
GTTTAATCAGAATAAGACCTTTTTGATTCGTATGCCACCAGATAAATAATTCGTATAAAT
GAACAAATTTGCCATCGCCTCGTACCTCTTGTGGAAATGAAACTGTTTGTACTTTGTATT
GCTTTGTGCCAAGTCCTCTGGGCTTCAGGACACGTCCTGCCAGAGTTCGAGCCCATCAGC
CTCAACTACCACGAGGCTGAAGGTATTCCCGCTGCAGAGCGTATCAAGCGAATTGAGGAA
GCTGTGGACTTTGATGGCACCAGGATCGCAGGAGGATCCACTGCACGCTTAGGGGATCAT
CCTTTCCTTGCTGGATTATTGGTGCTCTTGCAAAATCGCAGGACCTCAGTGTGCGGGTCC
TCTATACTTACAAATACTCGCCTGGTGACAGCAGCTCACTGCTGGTGGGATGGAACCAAC
CAGGGTACTGAAATTACCGCGGTCTTCGGATCCGTAACTCTCTTCTCTGGTGGCACCAGA
GTCACAACCAGAACCATTGCTATGCACGGTAGCTTCAACACTCGAAACTTGAACAATGAT
ATTGCCATCATTACTGTTCCCAGGATCAATTTCAACAACAACATTCAGCGTATAGCGATA
CCCAACAGCTCTCAGTCGTTCCTCTCCTTCGTCGGTAGCTGGGCTCAGTGCGCAGGCTTT
GGAGTAACCAGGGATAGTGAGAACATCAACAACAATCAAGTCCTCAGACAAGTGAACCTG
CAAGTGGTGAACAATATCGACTGCTCCACTGTTTATGGCTTCAATATCATAGACTCGACT
CTCTGCACCAGCGGCAGGGGTAACGTTGGACCTTGCGGCGGGGACTCTGGTGGTCCCGTG
TCGCTGGTGCACAGTGGCCAGCGTATCTTGATCGGTGTGGTATCATTCCACTCTGCTAAC
GGCTGCAACATTGGCTTCCCGGGTGGTCACGCCAGAGTTACTTCCTTCCGCTCCTGGATC
AACGCACGCATTTAAATTATGATACTGAACGATTTCCTAATAAAGATCTTTT
(1012 bp)

- SilkBase 1999-2023 -