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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp20382_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		clathrin_heavy_chain_[Bombyx_mori]
Ontology
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005802 C trans-Golgi network
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007291 P sperm individualization
GO:0007594 P puparial adhesion
GO:0008021 C synaptic vesicle
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0016020 C membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016183 P synaptic vesicle coating
GO:0016192 P vesicle-mediated transport
GO:0030125 C clathrin vesicle coat
GO:0030129 C clathrin coat of synaptic vesicle
GO:0030130 C clathrin coat of trans-Golgi network vesicle
GO:0030132 C clathrin coat of coated pit
GO:0030135 C coated vesicle
GO:0030136 C clathrin-coated vesicle
GO:0030141 C secretory granule
GO:0030198 P extracellular matrix organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032051 F clathrin light chain binding
GO:0033227 P dsRNA transport
GO:0033363 P secretory granule organization
GO:0035002 P liquid clearance, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0040008 P regulation of growth
GO:0045451 P pole plasm oskar mRNA localization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045807 P positive regulation of endocytosis
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048471 C perinuclear region of cytoplasm
GO:0048749 P compound eye development
GO:0071439 C clathrin complex
Transcript
Level		FPKM:57.63 TPM:45.53
ORF EntryO_BomoMG1547_complete:A_BomoMG_comp20382_c0_seq1
Sequence
(Nucleotide)
GCGGATTCATTTGTATATGTGGCATCCGAGGGTGTACATTATTCGTCATATTACTCCGAA
ACAGCCAAATTTATCCGCCCCTATTCTTCTTCATGTAGAATTCTAGAAGTTAGTTCGCGA
TTTTAAAAGGGTCGCCCGTTTTTTCGTTTTCGGTTTGTGTAGGACGGAGTGATCAATAAA
CATGGCGCAAGTATTACCGATACGGTTTCAAGAACATTTACAGCTTACCAATGTGGGAAT
CAATCCTGCTTCTATTTCTTTCAACACTCTCACCATGGAATCGGACAAGTTTATCTGTGT
TCGCGAGAAGGTTGGTGAGACTGCAGAAGTTGTCATTATTGATATGGCAGATCCAACAAA
TCCAATTCGACGACCAATCAGTGCAGACTCTGCTATCATGAATCCAGCTAGTAAAGTCAT
TGCTTTGAAAGGCAAAGCTGGTGTTGAAGCTCAAAAAACACTTCAAATCTTCAACATCGA
GATGAAATCCAAAATGAAGGCGCACACCATGACCGAAGACATTGTTTTCTGGAAGTGGAT
TTCACTGAACACACTCGCTCTGGTCACCAAGATGTCGGTGTACCACTGGTCGATGGAAGG
CGACTCGACACCCGTAAAGATGTTCGACAGGCATTCGTCGCTTGCCGATTGCCAGATCAT
TAACTACAGGACGGATCCGAAGCAACAGTGGTTACTGCTGGTCGGTATTTCTGCTCAACA
AAACCGGGTAGTCGGAGCTATGCAGCTGTACTCTGTCGAGCGCAAGTGCTCTCAGCCTAT
CGAGGGACACGCCGCGTCATTCGCCACATTCAAAGCGGAAGGCAACGCCGAGCCGTCCAC
TCTCTTCTGCTTCGCTGTGAGGACTGCCCAAGGCGGCAAACTACACATTATTGAGGTTGG
CCAAACGCCGGCCGGCAACCAACCATTTCCGAAGAAAGCCGTCGACGTGTTCTTCCCAGC
GGAGGCGCAGAATGATTTCCCAGTGGCGATGCAAGTATCGCCGAAGTATGACGTCATTTA
CTTGATTACCAAATATGGATACATTCACATGTACGACATCGAGACGGGAACGTGCATTTA
CATGAACCGTATCTCGTCGGACACGATCTTCGTGACAGCGCCCCATGAAGCGACTGGTGG
TATTATCGGTGTAAACCGCAAAGGTCAAGTGCTATCAGTGACGGTAGAGGAAGACTCAAT
AGTTCCGTACATAAACACCGTGCTCCAGAACCCCGAGTTAGCGTTACGCATGGCCGTGCG
TAACAACTTGGCAGGTGCTGAAGAACTGTTTGTGAGGAAATTCAACATGTTGTTCACGAA
TGGACAATACATTGAGGCTGCTAAGGTAGCAGCTATGGCACCTCGAGGAATCCTCCGTAC
ACCGCAAACTATCCAGCGTTTCCAACAAGTGCCCACGCAGCCAGGTCAAAATTCGCCGTT
GTTGCAATACTTTGGTATCCTCCTTGATCAGGCGCAACTCAACAAGTTTGAATCCCTTGA
ATTGTGTCGTCCTGTTTTATTGCAAGGGCGAAAACAACTGCTCGAGAAATGGTTGAAGGA
AGAAAAATTGGAGTGCTCAGAAGAACTCGGAGATCTTGTAAAGCAAGTAGACCCTACACT
TGCTCTCTCAGTTTACCTTCGTGCCAACGTCGCCAGTAAAGTTATTCAGTGCTTTGCTGA
GACTGGGCAATTCCAGAAAATTGTATTATATGCCAAGAAGGTTGGCTACACTCCAGACTA
CATTTATCTTCTTCGTTCAGTGATGCGTACTAATCCTGAACAAGGGGCGGGATTTGCAGG
AATGTTAGTCGCCGAAGATCCCCCTCTAGCAGACATCAATCAGATAGTAGATGTTTTCAT
GGAACAAAATATGGTGCAACAATGTACAGCCTTCCTTTTGGACGCTCTGAAGAATAACAG
ACCTGAGGAAGGACCTTTACAAACTAGGCTTCTAGAAATGAACTTGATGTCAGCGCCGCA
GGTAGCAGATGCGATCCTCGGCAACGCGATGTTCACGCAGTACGATCGCGCGCACGTTGC
TCAACTCTGCGAGAAGGCTGGATTGTTACAACGGGCGCTTGAGCATTACACTGACTTATA
TGACATCAAGAGAGCTGTTGTACATACTCACCTTTTACCAGCTGACTGGCTTGTCACATA
CTTCGGAAGTTTGTCTGTAGAGGACTCCCTTGAATGTTTGAAAGCAATGCTTCAGGCTAA
CATCCGTCAGAATCTGCAGATTTGTGTCCAGATCGCCACTAAATACCATGAGCAACTAAC
AACAAAGGCTTTAATTGAATTGTTTGAGAGTTTCAAAACATATGAAGGGTTGTTCTATTT
CCTGGGATCAATTGTAAACTTCAGCCAGGATCCAGAAGTCCACTTTAAATATATTCAGGC
TGCATGTAAGACTGGTCAAATCAAGGAAGTGGAGCGTATCTGTCGCGAATCCAGCTGTTA
CAACCCAGAGCGCGTGAAGAATTTCCTCAAAGAAGCAAAGCTTCCCGACCAGTTGCCTCT
TATCATAGTTTGTGATAGATTCGACTTTGTTCACGACTTGGTTTTGTACTTATATAGAAA
CAGTCTTCAGAAATATATTGAGATTTATGTACAAAAGGTTAATCCTTCTCGTCTGCCAGT
CGTAGTTGGTGGCTTGTTAGATGTTGATTGTGCTGAAGACATCATTAAGAACCTGATCTT
GGTTGTTCGGGGACAGTTTTCGACTGATGAATTGGTTGCTGAAGTGGAAAAGAGGAATAG
ACTGAAACTCCTCCTTCCTTGGCTGGAAACAAGAGTACATGAGGGCAGCAACGAACCAGC
CACACATAATGCTCTAGCCAAAATCTACATTGATTCCAACAACAATCCTGAGAGATTCCT
CAGAGAAAATCAGTGGTATGACTCCCGCGTGGTTGGCCGCTACTGCGAGAAGCGCGACCC
GCACTTGGCGTGCGTGGCGTACGAGCGCGGACAGTGCGACCGCGAGCTCATCGCCGTCTG
CAACGACAACTCTCTCTTTAAGACCCAGGCTCGCTACCTGGTGCGCAGGAAGGATCAAGA
CCTCTGGCTCGAGGTGCTCTCTGAGGAGAATCCTTACAAGAGGCAACTTATTGACCAGGT
GGTGCAAACAGCTCTTTCTGAAACCCAAGATCCTGAAGATATCTCTGTTACTGTAAAAGC
TTTCATGACAGCCGACCTACCCAACGAACTCATTGAGCTGCTTGAAAAGATTGTTCTTGA
CAATTCTGTGTTCTCTGATCACAGGAACCTTCAGAACCTTTTGATTCTTACTGCTATCAA
GGCGGACCGTTCTCGTGTAATGGAATACATCAATCGTTTGGATAACTACGACGCACCTGA
TATCGCCAACATTGCTATCAACAATGAATTATACGAGGAGGCATTCGCTATCTTCAAAAA
ATTCGATGTTAATACTTCTGCTATACAAGTACTGATTGAACAAGTGAAAGATCTCGAACG
TGCCTATGAATTTGCCGAGCGATGCAACGAGCCTGGTGTTTGGTCTCAGCTCGCAAAGGC
TCAACTACAGCAAGGTCTGGTCAAGGAAGCCATCGACTCTTACATAAAAGCGGACGATCC
CTCCGCTTACATGGACGTTGTCGCTACTGCTACCAAGCAAGAGTCTTGGGATGATCTTGT
TAGGTATTTGCAGATGGCCCGGAAGAAGGCGCGCGAATCGTACATAGAGTCCGAACTGAT
CTACGCTTACGCCCGCACCGGTCGCCTCGCCGATCTGGAAGAGTTTATCTCTGGCCCGAA
TCATGCTGACATCCAGAAAATCGGTGACCGTTGTTTCGACGATAAGATGTACAACGCTGC
GAAACTCTTGTATAACAACGTCAGCAACTTCGCTCGTCTTGCCATTACTTTGGTGCATCT
GAAAGAATTCCAAGGTGCCGTGGACAGCGCGCGTAAGGCCAACTCTACGCGTACATGGAA
GGAGGTCTGCTTCGCGTGCGTGGACGCCGGTGAATTTAGACTCGCGCAAATGTGCGGATT
GCACATTGTAGTACATGCTGACGAACTTGAAGACCTCATCAATTACTACCAGGACCGAGG
TCACTTTGACGAGCTGATCAGCTTGTTAGAAGCTGCCTTAGGGCTGGAGAGAGCTCACAT
GGGAATGTTCACTGAACTCGCCATCTTGTATTCAAAATACAAGCCCGTGAAGATGAGGGA
GCACCTCGAACTGTTCTGGTCACGCGTTAACATTCCCAAGGTACTCCGTGCTGCTGAACA
TGCCCATCTTTGGTCAGAGCTGGTATTCCTGTATGACAAGTATGAGGAGTATGACAACGC
TGCTCTCACGATGATGCAGCATCCCACCGAGGCTTGGCGCGAGGGACACTTCAAAGACAT
AATTACTAAAGTCGCGAACATGGAACTGTACTACAAAGCTATCCAATTTTACCTAGACTA
CAAGCCACTTCTCCTTAACGATCTACTGTTAGTACTGGCCCCACGCATGGATCACACCCG
AGCAGTTAACTTCTTCACCAAAGCTGGTCATCTGCAACTAGTGAAGGCCTATTTAAGATC
AGTGCAGAGTTTGAACAATAAGGCTGTTAATGAAGCATTGAACTCGCTGCTTATTGATGA
GGAGGATTATCAAGGCTTAAGAACATCGATCGACGCCTTCGACAACTTCGACACTATTGC
GTTAGCGCAACAGTTGGAGAAACACGAACTTACAGAATTCAGACGGATTGCCGCCTACTT
ATACAAAGGTAATAACAGATGGAAGCAAAGCGTGGAGCTCTGTAAGAAAGACGCTTTGTA
CGCCGATGCAATGGAGTATGCATCGGAGTCGCGCCAGCCCGAGGTCGCCGAAGAGCTCCT
CAACTGGTTCTTGGAAAGAGATAATTTCGAATGTTTCTCGGCTTGCTTATATCAGTGTTA
CGATCTCTTGAAACCCGATGTTGTCATCGAGCTCGCATGGAGACATAACATCATGGACTT
TGCCATGCCCTATCTTATTCAGACAGTTCGCGAGTTGACAACTAAAGTAGAGAAGCTTGA
AGAAGCAGACGCCAAGCGAAGCACCGAGAATGCGGAGCACGAAGCGAAGCCCACCATGAT
AATAGAACCACAACTCATGCTGACTGCCAGTCCATCGATGCCGTACGTGGTGCCGCCCCA
GCCGTCGCAGTACGGGTACACTGCGCAGGCGCCCTCGCCCGCCCCCTACCACGGGTACGG
CATGTAGAACGCCGCCACCCGCCTCGTCTGGGGGAACCTCGCTCCCTACTGAGACAGGCG
CCCTCCCACACACCGACACTACACCACACGATTCGAGGCCATGACACTCAGAATGTCCTT
ATCGCCTACACAAAAACTTCAGTCTCGACAAAAAAATATAAATTATGTTGTTAAGTACTT
GTAACTTTCACACATTTCCATCTAACAATATACCGCTATATATGGAGAACCTTAATTAAT
TTTAAACATTTATGGCGGTAGTACTTTCTATGTTTGCAGTAGGTACATTTTGCTAAACAA
AATTATTATATTGAGAGGAATACTCATTTAGCTGATTTAGCTCTCGAGCCCTCCTCAGAA
CGAGATTTACGTGAATATTTCAATAGCGACCAGATATAAACTTATATATATATAATAATA
TATGCTGTGCCCTCACAACCTTCGTAATTGTTACGTAAAATCCCTTGATGATTTAATTTT
TCTGCGATGCTGTGGCCTAATCTTTCATTTATATTAACATGATTTCAAAATTAATCTGTC
GGTAAAGCTGAGGGGTGCTTTCTCTGCTGCTTCTTCTGCTGGTCCTTTGAGAATCATACA
ATTTAGCGTGTACAAATTATATTAGTATAGTCGCTAATCGACTATGTATTGTTAAAAGTG
CTTTATTTTTAAATAAAATGAGTTTTCAAAATATAAAGCTTCTTAAACAGATACTATAAT
TCAACCGTATGTAACGTGCATTCTGCGAATATAGAGATATGTATACTAATATTCTAATTT
TGCAGTTTCTATAAACGAACGTAGTTGATTAAAAAAATGTATAATATTTAAACTAAAAGA
TTCCATGTGATAGATATTGTTGAAGATAATACAGCCGAAGATATATATTGAATTATTTCA
GTGAAAGCTTGGTTCGCCACTACGTAAATAAATAAGTAAATTAATGAATTTACTTATGTA
CATAATTGGCGGTACTTTATCATTGCTTTCTCACATCTGAGAATTACATTAAATTATTAC
ATAAAATATAATCTACTTAAAGATAATTTATATTCATTGTAATGAAACAAGAAATCATTT
TGGTCGAACGAAAATTAATTAATATTATATTCTCTACCGTGCAATAATTTCAGTTCTCTC
ATAAAGAAGAGATGCTTAATATATTGTAATATGTATATAATGTTTACAGTTTTGAGCCAG
TTGAAATTAAAAAGGAAAAATGTTTATTATTCGATTATGAATATTATTTAGATATGATTA
GGTTTAGTTTTAGACGGAAAATAGTGGTATGATGTTAATTTTTGTGTAATGTATGTGTGC
GAGTGTGTAAGCGGACCGCACGCACGTGATCACCTGAATTTGATGCCTTCACTTAGATAG
TTAGAACGCGTATAGAGGACGCGTTTTTTTTTCTATTTTGTTAATTTTTTTTGAACACAA
GGTCTAATTCCTCGAGTTATGGTATTAGTAATCTAAAGTTTATCTCGGTTCCGCATACAG
TTATATAGTAATAACCGTATAGCCGCGAGTCGCTAATGTAGAACGTTGAATCATTCAAAT
AATCATTCCTGTAAAGAAAATGAAGTAACGAAATAATCTATACATTGTTGCGAAATGTTT
AAAACCTTCTTTCGAAGATTTATAGAGAATTATCTAAATGTAGAAGGAAAGTTCATTGTT
TAATGGTTAGAATTGTATTTATTCATGTATGATACTGTTTCCCTGAATTTTATTATTGTA
ATAAGAATATAATAATGAAGAAAAAAAA
(6988 bp)

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