SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp20166_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_homogentisate_1,2-dioxygenase_[Amyelois_transitella]
Ontology
GO:0004411 F homogentisate 1,2-dioxygenase activity
GO:0006559 P L-phenylalanine catabolic process
GO:0006570 P tyrosine metabolic process
GO:0006572 P tyrosine catabolic process
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:30.18 TPM:23.85
ORF EntryO_BomoMG1327_complete:A_BomoMG_comp20166_c0_seq1
Sequence
(Nucleotide)
TGTTTTTCGATATATCTGTATCTTATAATAAACAAACCAGTTCGATTAGCATAGCGGTCC
GGTATTGTCGTAAAGACGTAAACATCTCGGAATCAGAACGCCCAGTATCTCGCCGTCTCG
GCATCAGTGAAAACTTGTAATCGTTTATGTGACAAAATGACCGAATTAAAGTATCTATCG
GGCTTTGGTTCGGAGTTTTCTTCAGAGGACCCGCGGAAGCCGGGATCGCTTCCGATCGGT
CAGAACAGCCCACAGAAATGCCCCTATGGTCTCTATGCCGAACAATTATCAGGTACAGCT
TTCACCGCTCCAAGGCACGAGAACAAAAGATCCTGGTTGTATAGAATACGTCCCTCCGTT
GTACATAAGCCGTTCAAGAAATTAGACATTGCCAAACATCTCACGCACAACTGGGATGAA
CAAGAGCCGGATCCTAATCAATCTCGCTGGCTTCCCTTCGACATTCCATCAGACGAGTCT
GTGGACTTTGTGACCGGACTCCATACGGTGTGTGGTGCTGGCGATCCTCGCTCTAGACAT
GGAATAGCCATCCACGTGTACTTGTGCAACGCTTCCATGGATAAAAGCGCATTTTACAGC
AGCGACGGAGACTTTCTAATCGTGCCACAGCAAGGCAAATTGAAGATCACCACTGAATTT
GGTCTAATGGAGGTGGCCCCGAATGAAATTGCCGTTATTCAACTTGGAATGAGATTCGCT
GTATTTGTTGAGGGTCCTACCAGGGGGTACATATTAGAAGTTTTCGACGGTCATTTTAAG
CTGCCTGATCTTGGACCTATCGGAGCTAATGGACTGGCGAATCCGAGGGATTTTCTAACA
CCGGTAGCTCACTATGTTGATGAAGAAACTCCTGGTTTCCAGATCTTCAACAAGTACCAA
GGGTTTCTATTTGTTGCCGAACAAAATCACAATCCGTTCGACGTAGTTGCTTGGCACGGA
AACTATGTGCCTTACAAATACGATCTAAACAACTTTATGGTTATCAACGCTGTTTTGTAC
GATCATTGTGACCCTTCAATATTTACGGTGTTGACGTGTCCTTCTGCAAAACCTGGGATC
GCCATCGCTGATTTCGTAATATTCCCACCCAGATGGTCTGTGCAGGAGCACACTTTCAGA
CCTCCTTATTACCACAGAAACTGTATGAGCGAGTTCATGGGGTTGATTCTTGGTTCTTAC
GAGGCGAAAGAAGGCGGTTTCCTTCCCGGCGGTGCGTCTCTGCATTCCATGATGACACCT
CACGGGCCTGACGACAAATGTTTCAACGCTGCATCCAATGGAGCACTAGTGCCGCAGAAA
ATTGCAGTAGGAACTCAGGCTTTTATGTTTGAATCTTCTTTGAGTCTGGCCATCACCAAG
TGGGGCGCGGAAACCTGTCAAAAATTGGACCCCAAATATTACGAATGTTGGCAAAACCTG
CCAAAGCATTTCTCGGATAAAGCAAAAGTCTAATTTTATTCACAAAATAAGATTTTGTAT
GACATGTATCATTTTTGACATCATTTATTATCAATAAAAAACTGTG
(1546 bp)

- SilkBase 1999-2023 -