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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp20110_c0_seq2
Scaffold_idBomo_Scaf126
NCBI non-redundant
(nr)		PREDICTED:_Usher_syndrome_type-1G_protein_homolog_[Amyelois_transitella]
Ontology
GO:0001917 C photoreceptor inner segment
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007605 P sensory perception of sound
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030507 F spectrin binding
GO:0032391 C photoreceptor connecting cilium
GO:0036064 C ciliary basal body
GO:0042472 P inner ear morphogenesis
GO:0042803 F protein homodimerization activity
GO:0045494 P photoreceptor cell maintenance
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0060113 P inner ear receptor cell differentiation
GO:0060122 P inner ear receptor cell stereocilium organization
Transcript
Level		FPKM:27.93 TPM:22.07
ORF EntryO_BomoMG1273_complete:A_BomoMG_comp20110_c0_seq2
Sequence
(Nucleotide)
TTTGGCTAAGTTTGACGGTTATTCTGTTAGGAGATTGTTATTATTTTTCGCGTTGAATTA
AAAGTACTTTTGTGCACATCATTTTATGAAAATAAATTTAAATAAATCAATTATATCACT
ACTATATATAATTAAATAATTTTGTTGTCAAGTTATCTGATATTTAAGTTTAAAAATATA
GTTAAAATAAAGAGCTTTCCCTTAGGAATTTTTTATGTGTTAAATTTATGGAATTGATAA
AAATGAGTTGAATAAACTTTTGTCGGACCTCGTTTGGATCTCAAATCATTGTTCGTAGTG
TGAAAAAAAAAGAAGTACAAAAATGTCCACGGACAGGTTCCACAAAGCAGCCAAAGATGG
TCTACTGGAGGTACTGCGGGAAGCGACACGCAAAGAATGCAATAATAAAGATGAATCTGG
AATGACTCCCACGCTGTGGGCTGCTTTCGAAGGACACATAGAAGCCCTGAGACTACTATG
CGGGCGAGGCGGTGAACCAGACAAGGCCGACTATTTCGGCAATACAGCCCTTCATCTAGC
AGCGGCCCGGGGTCACAAGGAATGCGTGACTTTCCTGGTCAACTTCGGAGCTAATGTGTA
CGCTATGGACGTCGACGGTCACTCCGCTCAGGAGCTGGCCGCTATTAATGGCAGAGAGGA
TATACTCCGGTACCTGGACCAGTCTACAGCAAAACTAGAAAACAATGATAAGAAGAAATC
GAAAGCGCTCAAAGAGAAAGCCAGAAAAGACTACGAGAAATCGCAGAAGCAGTATCAGAA
AAGACAGAGCAAAGCTGATCTCATGGCCGAGAAGGAAATGAAGAAGCTGGCCAAAGAGTG
GGAACAGGGTTATGGTGAGGAGGTGTCCACTATGCCACATCGGCCCAGCAACGTGCTAAT
AGCGCTCAAGCAAAAGATGATCAGATCTACAAGTCAGGGTAACCTCCTGGCGGACGAGCA
GCCCCGCCCGACGTACAGCACGCTGGTCGGCACCGTGAACTCGGGCGTCCGGGGCCGCGG
CGCCGTCTACAAGAAGGCCCTCGCCAGCAAACTGCGCAACAACACGATCGGCCGTAATGG
ACCGAATGATGACTTCAAGGTTGGCGAATTAGAAACGACCGGTCGTCGTTCTCTGACGTC
ATTATCCGGGCTCCGTCGCGACAGTGAAGTGATGTACGTGGGCACGTTGGGCGCGGGACC
GCAACACCGGGGGAACGTTACCGACGTGTTCACGGAGGACACCGATCAGAAGAAACCGCC
ACTGACAAGATCGGCAAGTCAACCGGATTTCACGGTTCTGTCTGGAGAAGACAGCGGCAT
AGGACAGGAGGTGATGCTGCAAGAGCCCGCCAGTATATTCGACAGACCAGGATTCGGGAG
TGTAGCCTTTAGACGGTCCATAACGGCCACGCTGGGCGCGATGCCGGGCGCGCCGGGCGA
GGACCTGTCCATCGGCTCGGCGGGGTCACTGGCCGCGCGCCACGCCCCCCGCACCGCCTA
CCGCCCCGCCGAGTGGACCGAGCCGCACTCAGAGAGCTCGACGATAACTTCGGACGAGGA
GGGGGAGGCCGATGAGTCCGGCTCGGCGTCCCTAGAGCGTTTCCTGACCGCGTGGGGCCT
CTCGCAGTACGTGCAGAAGTTTCGAGACGAACAAATCGACTTGGAAGCGCTCATGCTGCT
GACCGAGAGCGACATGAAATCGCTCGGCCTACCTCTAGGTCCGTACAGAAAACTCGTCAC
AGCTGTCCAAGAGAGGAAACAGGCGTTAACTAACCCGGGACCCATAGTCGACACGGCGAT
CTGACGGCGGCCATTGTCATTGTCATTGTCATCAGTCGCCAGTACCTATGGAGTTTGTGT
GATTTTTCTTACTAGCTAATAACGTAATATTAGTACGGTCAGCATAACAATAATATCACT
TTTAAATAATTCCAAATATAATGATATAAAATACATCGGACAATGAAAGATTTAACTGCG
TTTTCTGTATTATAAATGCGAATTTATTGACAATATAAAATTAAAACTATAATAAATTAT
TCTAACAAAATATTCACTCGTCTGTAAAATAAATACGAAAACAATATTTAAAGTCCTTAT
CTATGTGTGTTTAAATTAATATATTATACAATATTATTAGTATATTATGTAAGAGTGAAT
TATTTCTCTTCATTGAATGACAAGTGAGTGAACTTTTCTAAGAAAAATCTTTTTAA
(2216 bp)

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