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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp19958_c0_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_tetratricopeptide_repeat_protein_21B-like_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0008589 P regulation of smoothened signaling pathway
GO:0021591 P ventricular system development
GO:0021798 P forebrain dorsal/ventral pattern formation
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072372 C cilium
GO:0097542 C ciliary tip
Transcript
Level		FPKM:5.97 TPM:4.72
ORF EntryO_BomoMG1170_complete:A_BomoMG_comp19958_c0_seq1
Sequence
(Nucleotide)
AAAATTCGGACTCTGTAGGTTTGAAAATAGTTTCTCATGTCTGGAATGTTAACAAGAGCT
CGCGCTTTCTCCACGGAAGCTCTAAAAGTTGTTAACAATGTTGCTAAGCAACAGTTTGCT
GTGTCAATAAAAGGAGAAGATGCTGTGATCAGCTATGAGAAGAAAGGCAAGGGGATAACC
TTGATCCATACAAATGTGCCGCAGGCTTTTCAAGGAAAAGGAGTTGGGAAATTATTGGCA
CAGTATGCCTTTGATCATGCTTTAGAAAACAGGTTGAATGTGATTTGCAAATGTCACTTT
TTAGCCAAATTCTACGAAGACAACATTAATAAATATAAGGTGCTAAATGTAAAACTTGAA
TTAGAATAATTTAACCATGGATTTGGCTTGGCATAGATGTAATATTCATTATTATTTACG
GGAAAAATACTATGGTAATGTTAAGAAAATTTCAAACGAAGCGTTGCAACAAAATCCTAG
GAACTCAGAATTTATTTTCTATACTGGAATTGCATTGATATTAGAAGGGCAAGTTCATAA
AGGGATTTCTGAACTAACTCCGCTCCAATCAGACAGTGAGATACAATTGGCAGTGATCAT
TGCTCTAGTTTATGCATACAAAGTTTCTAATTTACCAGAAAAAGAGGTGTTGTTCAATTT
AGAATCAAAATTGAAGGAAGAAAAGAAACATGCAAGCATAACTTCATATTACTATTCAGC
TTTGTTTTTATCATTAGCAGAAATAAATGAAAAAGCATCTGACTATTTAAATAAAGTATT
TAGAAAAGATCCTAATAATTTAGATTCTATAATTCTGAAGGGATGGAATGACCTGGGCTT
GAGTCAGGAAAAATCACCGAAATCCACTATAGAATGTTTAGAAGCAGCTATCAGAAAAAG
TGATAACAGTATTGAAGCACTGCTTGGGTTGGCAAAATTGAAATATCTAGCAAAGGACTA
TGATGCATCAAATTTAACATTAGATAGACTGATTATTAACAACTCAGGGCAAGTAGTACC
CCTTGTCGAGAAAATGAAAAATGAATTTGCAATGCAGAAATGGGAAGCGGTTTTCGATAC
ATTAGAAAGAATATTTTCTATAGATCCAGATAATGTTGAGGGCTTGAAAATGAGAATATA
TCTTGCACTTGGTAAACGATCTGATTATATAGAAGCAGCTGATCAATTGAACCGCTTTTT
TGGTATACTCGAAATTGAAGAAAGCCATAATGGACATCAGTTTTACTATACTGCTCAAAT
CTTTTCTAGAATTTGTGGGAGGTCAAGTGCAGTTTTGTCTCAAGCTTATAGATTTGCCCA
GTATGCTTCAGAAATGTATTCAAATAATGTTGACTATCTCAGTGAAGTTGGCTACCAGTG
TATCCTTCAGGCAAAATATAAAGACGCACTGAGTTTCTTTAGAGCTGCAAGTAAATTGGA
CAATAATTCCATCACAGCACTCTGTGGATTGACTCTCTGCCAAATGTTAGAGAATGGTCC
GACAGACCAAATAACCCAACAAATTGAATTACTTTTTGAGATGCAAGGAACAGAAAAGTT
ACCACTTCTATACTTGTTGTCTGCCCAACTAAATATCAAGAACTCATCTAATGCAGTACC
ATTGTTAAACACAGCCTTTGAAACAAAATTAAATTTAGCCTCTCGCAATCCCATGAGTTT
AATTTACATTAAGGACTTAGACCCAGATTTTGTTTTAGAAATTTACAAAGAGTACAAAAA
GCATTTACCAAAGAAGCCGTTTATTATCATTGGGTATCTGCTTTATTCTCAAGAAGGAAA
CATCCCTGTTGTAATCCAGTGTTTTAAAATCTTAAATGCTGTTTGTGAAGCTTGCTCAGG
TTTGATACCAGGCTTATTTGAATTGGCTAAATTGAAATTTCTTTTCGGATATGCCATTGA
AGCTGAAAAAATAGCTCAACAAATCGCTGAGTTGGACAATACACATGCTGGTAGTCAGAT
TTTACTATCACAAATTTATATACAACAGCAAGAATATGTTAAAGCTGAACAATGTTTAGA
AATTTGTCTGAGTTACAATTTCAAAGTCAGAGATAGTGCAATGTACCATTTTATAAATGC
AATAGTTTTAAAAAGCAAAGAAAAATTACAAGATGCTTTGTCAAGCTTCTTGACAAGTCT
TCAGATAGCAACTAGTAAAAGCAACATGAGCAGAACATTCGATTCAGACTTGAACATTAT
TGATAAAGCTACTTTGTATCTACAAATCATTGAGATACACACAGCTTTAGGGCAAATTGG
GGAAGCGGGCAAAGCCATGCAGGAAGCAATTCAAGAATTTTCATATACATCAGAAGAAAC
TCGGCTGTTAATATCACGTGCTGACTTGGCTCTGAATCAAGGGGATATTGACAGTGCAAT
TGACATCTTAAATGAAATAAAGCCCGGACAGCCATATTACTTTCAAGCCCACAGCAAACT
GGCTCATATTTATTTGAAAAATAAAAAAGACAGAGCCATGTTCACAACATGTTTTAAAGA
GATTGTCAGTAATCATCCAATGACAGATGCCCATACGATGATGGGAGATGCTTTTATGTC
GATTCAAGATCCAGCACAAGCGGTGGAGTCATACGAGACCGCCCTGAGAGGCAACCTCGG
GGACCTACAGCTCACTAAGAAACTCGGCGCAGCTTTGTTCAAGATGCACGAATACGACAA
GGCCGTGCAGCACTATGAGAACGCGATGAAAACGTTCAACGACGACGAACTTAAATTTGA
ATATCTCGATCTACTCGTCAGATTAAAACAATACGATAAAGCGGACACTACTATATCTTC
GGAGCTGAATCAGGTGTACAATAAAGAGAAAGACATCGGAACACTGAGGCGCCGTGTCCG
ATTGCTACTTAAGCAGGCGAAATGTAGAGAACTGAAAACTCCGACTCCGGGAAACGTCAA
TTTAATATTAGCCGAAGCAAAAGAATTGCAGTTATCGATCGTCAAAAGACTAGAGATAGA
CTCGAAGACGGATCTGCAGGAGGAGAGGAGGCAGCTTTCGAACATATTGTGCGCTTTGGC
GAAGTTCAAAAGCATGAGGGAGCCGGCTGTCGCGGCTAATTTGTATTCTGAGGCCCTAAT
TCATACTCCCCGCGAGCCGAGCACGCTGCTGGCCCTAGCTAAGCTGTACGCGCAGATGAA
TAATCCAGAAAAGTGCGAGCAAACTTGTGCAGTTTTATTGAACGCAGATCCGAATAATGA
ATCTGCGGCAGTCATGATGGCAGACCTGGCGTTTCGTAAGGTGGATCTAGAAACAGCCCA
ACGGCATCTGAACCAGATCTTATCGGTGAAGCCGACGAGCTGGGAGGCTCTCGCGCAGCT
TGTCGAGGTGCAGTGGAGACGCGGGAAACTCAGCGAAGCCGAACAGGCCTTGGAACTCGC
CAAGCAACACCTCGACGATCCGGACGACCCGGGCTACAAGTACTGCGCGGGCGTGTGCGC
GGCGTACGGCGGCAAGTGCAACGCGGCGCTGCGGGCGCTGAACGCGGCGCATGGGGGTCT
TGGGGCTTCACCAGGGTTGC
(3560 bp)

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