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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp18451_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0032183 F SUMO binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.01 TPM:1.59
ORF EntryO_BomoMG502_internal:A_BomoMG_comp18451_c0_seq1
Sequence
(Nucleotide)
ATCCGATTCTTCGGACGAAACACGTTCGGCCGCGCTTAGTGCCACTCTAGCGTACTCATC
AGTGTCGATACTTTTGCAGAAATGGATCGCGTATCTTAGTTTTTCCCGTAAAACAGATTT
ACACGAATATCTTGGCATCTTGAGGAGAAAGAAACACGTGTAACTCTCCGGTAAAAAGTG
ATCCGGTGGTTGGTATTTATCGAGTACCTGTAAGACGAAATCCCTTTGTCTTGGATCTTG
CGGCGCTCTCGGCAAACGTGTCCGGCCCCATACGAATCGAAGGAACAAAGCGCGCTCGCT
TCCCGACAGCTCTTCCATTACTTCCCAAAACCATTGAACTAGGGGCGCATTTGGTTCGAC
ACCTTTGTAAGTGGCGGAAGCGCGTAACGCGTTGACCGGTATATCGGGCGAGCCGCAGAC
CAGAGTCTCGAGTTCGGACGCGTTGAAGAGCGCGACGAGCGGCGCCGGGATCACGCGGGA
CATGCCGTCCCGGACCGCACGGACTTGCTCGTCGAATTCATGGAGCCTGTAATGCAATGC
TAACTGCACATATTCCTCTTTATTGTCAGGGGTGACCCTCTTATGTCGAGTAGACAGGGG
TACTTCATGCCCAGCCGCCGATGGTATCGAGAACGGCAACTCCAGGTTCTGCAGCTCCTT
ATTTTGCGGAGTCATATCTCGGATGCACAGTAGAGCTGGCAGGAAATCTTTGTCGACTTC
GGCGAGATCTTGTGGACGCAGCGGTTGTCCTGCCAACTGGCGCCAGACGCCCTCCGCCAG
AGACAATGACAACGGCGAACCAGTTCTTATGGCGATGCCCATCAGAAGACCCAGGAACCT
AAAGCAGTGCAGGTGAAGAGGCGTATTGGCAGTTGGGTTCAGTAAGAAGGCATCCCTGGA
GGCGCCGGCGTCTCCGCGTCCATTCGGCGTCGCCATTAACAGCGGCAGCGAACCGTTCTG
AAGTTCTTCGCACATCTCGGCAATGCTCTCGCTGTACCCTCCACCACAGTCATCAACACT
TTCCCCTACAAACTTGACCTTCCAGACGCGGTGCGGGAGGGTGAGCGCGTCGTGCGGGAA
GGTGGGCAGGCGCGCCACCATCTGCCCG
(1108 bp)

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