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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp17591_c0_seq2
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		p53_[Bombyx_mori]
Ontology
GO:0000077 P DNA damage checkpoint signaling
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0006978 P DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0007049 P cell cycle
GO:0007283 P spermatogenesis
GO:0009411 P response to UV
GO:0010165 P response to X-ray
GO:0016525 P negative regulation of angiogenesis
GO:0042771 P intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043065 P positive regulation of apoptotic process
GO:0043280 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045786 P negative regulation of cell cycle
GO:0045787 P positive regulation of cell cycle
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048730 P epidermis morphogenesis
GO:0051262 P protein tetramerization
GO:0051289 P protein homotetramerization
GO:0051597 P response to methylmercury
GO:0051782 P negative regulation of cell division
GO:0060216 P definitive hemopoiesis
GO:0060729 P intestinal epithelial structure maintenance
GO:0071456 P cellular response to hypoxia
GO:0090398 P cellular senescence
GO:0097193 P intrinsic apoptotic signaling pathway
GO:2000779 P regulation of double-strand break repair
Transcript
Level		FPKM:2.07 TPM:1.63
ORF EntryO_BomoMG278_3prime_partial:A_BomoMG_comp17591_c0_seq2
Sequence
(Nucleotide)
TTTTAGTTTAAGTTACGGTATCCTTGCTGAATTGGAGATAGTGAACTTTATGTTTGTCCT
AACCCTGTCTAGTCTGGTTCTTCATAGAGATCTGTACTGCAGCAGTGTGTTGTGGTGTCG
ATGGAATCTGTACCCACTTCACACTAGTTCTCTCTAATTATTTAAATGAAACACGAAATC
ATGACATCTCTTGAGGTTGCCACATGCGAAGATGACATAGTGAACATTGATTTGAACACT
ATACCGGATGAAGCATTGTTTCAAGGGGGGATACACGATCAAGTTGACATTGGAGTGCTA
GATGACATTCCGTACATAATCAGTGATGTGTCTAACAATTCAAACAATTCCTTTCCTCTT
GGACCCCGAGGACCGCCGCCTCGCAAAGACGATCCCGGGCAATACAACTTCAGCGTCGAA
ATCCACAGCAAGGATACACACAAGAAGAAGTTCTTGTTCTCGCACAAGCTGAACCGGATC
TACGTGAACATGGAGACCGACTTCGCTGTCCAGTTCAACTGGGAGCTGGTGGACCTCGCC
GTGACGCAGATGTACGTGCGCGCCACCGTCGTCTTCGAGGACGAGTCCCAGGCCGAGAAG
AGAGTCGAGAGATGCATCCAGCACAAACTCTGCAGTTCCGATAAAGGCCAGGACCGCGTC
GTGTCGGAGAACGTGCTGCGCTCGTCGCGGCCCCTGGGCACCAACGACGTGCAGTACTGC
GGCCACCCGGACGACCCCGACTACTGGTACTCCGTGCTGGTGCAGCTGCCCAAGCCGGGC
CGGGAGCCTTGCACGCACGCCTTCAAGTTCGTCTGCAAGAACTCCTGCAGCACCGGCATC
AACCGCCGCTCCATAGCCGTCATCTTCACCCTGGAGAGCGCCTCCGGCTCGGTGCTGGGG
CGGCAGACGGTGGGCGCGCGGGTGTGCTCGTGCA
(934 bp)

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