SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp173102_c0_seq1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_THO_complex_subunit_3_[Amyelois_transitella]
Ontology
GO:0000346 C transcription export complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006397 P mRNA processing
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0031124 P mRNA 3'-end processing
GO:0046784 P viral mRNA export from host cell nucleus
GO:0051028 P mRNA transport
Transcript
Level		FPKM:2.71 TPM:2.14
ORF EntryO_BomoMG28457_5prime_partial:A_BomoMG_comp173102_c0_seq1
Sequence
(Nucleotide)
GAAGGATTCAAAGCATTCGCAAGCTCCTATAGAAGATTTAAGTGAATTACGTAGTTATTT
TGCGTCACACAATACTACACGCGAGTACATTGCACATTCATCCAAAGTACATTCCGTGGG
CTGGTCCTGTGATGGTAGAAAGCTGGCTTCTGGGTCATTCGATAAAAGCGTTGCAATATT
TAATTTAGAGAGGAGTAGATTGAGTCAAGATTTTATTTTCAAAGGCCACACAGGCTCTGT
AGATCAACTCTGCTGGCATGCGTCACATCCTGATCTCCTGAGTACAGCGAGCGGAGACAA
ATCTGTTAGGATATGGGATACACGATCACACAAATGCGCGGCGACAATCCCAACCAAAGG
TGAAAACATAAATATAGCATGGTCTCCTAATGGCAACACCATTGCGGTAGGGAACAAGGA
AGATTTAGTTTCATTTATCGATACAAAAACTTATAAAGTGGTAACAGAAGAACAGTTTAA
CTTTGAAGTGAACGAGATATCATGGAATAATACATCGGACTTGTTCTTCCTCACCAACGG
ACTGGGATGCGTACATATTATGACTTATCCATCTCTAGAATTGCAGACAGTACTGAAGGC
GCATCCTGGTACGTGTATCTGCATCGAGCACGACCCAACCGGTAGATACTTTGCTACTGG
GTCAGCCGATGCTCTGGTCTCACTATGGGATGTCAATGAACTGGCCTGCTTAAGAGTTTT
CTCCAGGTTGGAGTGGCCGGTCCGGACGCTGTCGTTTAGCTTCGACGGCAGGCTGCTGGC
GTCCGCGAGCGAGGACCACATCATCGACATCGGAGACACGGAGACAGGGGAGAAAGTAGC
AGAGATCCCGGTGTCCGCGTCCACGTTCACGGTGTCGTGGCATCCCGCGCGCTACCTGCT
GGCCTTCGCCTGCGAGGACAAGGAGCCGCCCGAGAGGAAACGGGATTTGGGGAATCTCAA
ACTGTGGGGACTCTCTAGTTCTTAGTGTTGGAAATGTAATATACAAAATAAACTAAAATA
TACTATATTTTTTTTGTGGATTTAAATATAT
(1051 bp)

- SilkBase 1999-2023 -