SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp138939_c0_seq1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin-conjugating_enzyme_E2_T-like_[Papilio_polytes]
Ontology
GO:0000166 F nucleotide binding
GO:0003682 F chromatin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006513 P protein monoubiquitination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0035519 P protein K29-linked ubiquitination
GO:0036297 P interstrand cross-link repair
GO:0044314 P protein K27-linked ubiquitination
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
GO:0070979 P protein K11-linked ubiquitination
GO:0085020 P protein K6-linked ubiquitination
Transcript
Level		FPKM:4.81 TPM:3.80
ORF EntryO_BomoMG28081_complete:A_BomoMG_comp138939_c0_seq1
Sequence
(Nucleotide)
AGAATTTTGAAATGAAGCCACCCCCCCGGTCATAACAATGAATTGAATTAAAAAGTACGA
ATCTTCTCTCAGAAATTAAGTATCTAAATATCAAGTAATACTATGCTATCAAGTGCTAGA
GCTGCTCGCATCGCGCGTGAGGTGAAGAATTTTGAAATGAAGCCACCTTGGGGGATTAGT
TGTTTTCCGTTAAAAGACGATCAGTATGACAACCTGTCCGTTATTCTTCTTGGACCAAAG
GGATCTCCTTACGAGAAAGGAACGTTCAAATTAACTGTGTCTATCCCGGAAAGATATCCG
TTCGAGCCTCCTTTAGTTAAATTTATAACACCAGTTTATCATCCTAATATTGACAATGGA
GGAAGAATATGTATGGACCTGTTAAAAATGCCACCAAAAGGTACTTGGTTACCGACGATC
ACACTGGAAACGTTACTTGTTTCATTACAATCACTCCTCGCGAACCCAAACCCTGATGAC
CCACTGATGATGGATATCGCTTATGAGTATAAATACAACATGGATACTTTTATTCAGAAT
GCTAAACAACAAACTGAGAAATATGCTGTGTGATATCAGGACTAATGATAACATAAAAAA
TGTTAACTTGAATTTATTATTAAGTGAAAAGGAATAGAGTTTTATGATTACAGGCCAAAG
TTGTTGACCCACTTGATTTAGAGTACTTAAAATGTAGGCCGTATTCATTGTTTTTATATG
CCCTTTGTTTTATATGTATATGTATAACTTTCAGGATACTTATAGGATACTTTCACAATT
TTAGATGCATCTCATCAAACATTGTCTTGATATCTGCAATGAGTATTAAGCTGTGTATCT
AATATATGCTAACAATATATTTTTATATGATATATTCCATTATTAATAGAAAATACAAAA
TTAGTACCTGTTATAATAATTTATGAAATTGATAAGAGAAGTGCCCATACAATATTAAAA
AAAAAGTGTTTGTTACAAAAA
(981 bp)

- SilkBase 1999-2023 -