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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp133219_c0_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_cycle_like_factor_b_isoform_X2_[Bombyx_mori]
Ontology
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0000976 F transcription cis-regulatory region binding
GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001046 F core promoter sequence-specific DNA binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001190 F obsolete transcriptional activator activity, RNA polymerase II transcription factor binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007623 P circadian rhythm
GO:0016604 C nuclear body
GO:0016605 C PML body
GO:0017162 F aryl hydrocarbon receptor binding
GO:0032007 P negative regulation of TOR signaling
GO:0032922 P circadian regulation of gene expression
GO:0033391 C chromatoid body
GO:0042176 P regulation of protein catabolic process
GO:0042753 P positive regulation of circadian rhythm
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043425 F bHLH transcription factor binding
GO:0043565 F sequence-specific DNA binding
GO:0045599 P negative regulation of fat cell differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048511 P rhythmic process
GO:0050767 P regulation of neurogenesis
GO:0050796 P regulation of insulin secretion
GO:0051726 P regulation of cell cycle
GO:0051775 P response to redox state
GO:0051879 F Hsp90 protein binding
GO:0060137 P maternal process involved in parturition
GO:0070491 F DNA-binding transcription factor binding
GO:0070888 F E-box binding
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:0090403 P oxidative stress-induced premature senescence
GO:2000074 P regulation of type B pancreatic cell development
GO:2000323 P negative regulation of glucocorticoid receptor signaling pathway
GO:2000772 P regulation of cellular senescence
GO:2001016 P positive regulation of skeletal muscle cell differentiation
Transcript
Level		FPKM:3.26 TPM:2.57
ORF Entry
Sequence
(Nucleotide)
TAGATATTAGTTATATTACTAATATATAATTGACACTATGATATATTTCAAATGAAGTCA
GCCAATAGGTAAGTTCATGTGTCCATGAATTTTAGTAAAATAAAGAAAAACAAAATCAAC
TCGCTTTGATACTAAATTCTACGGATTTAAAAGCCCTTTTTTATTATATTACTTTTTAAA
ACAAAATAAACTACTGTATATTAATATTATTTATATATTTAATAATGTTACGTTGCTATT
AACTCGTTTACGATAACATTTTCAAACTTAACACGAGTATATTATATCTACCTCGCACTT
AAAAAAAAATTAGATTGCACTAGTAAAAGACACCTCAACCATTTTGAGTCCCTTCAAAGA
CAATTAAAAAAAAGATTATTCTAAACAATTACATTAGTAAATTCTTTCTAGATTTCACAC
ACTGGTTTTTGTCATTTTCGTTCAATTCTAATGTGACTCATATGTTTTCACGGACTTTTA
ACCCATTAATTACTTTCTTTGTTAATTTAAAGTTTCTTCAGGCTTAAACGTGTTATATTG
GTGATTTAAATGTTTGGTATCTGTGTAAGTGTACAAGTGTGGGGAAATAAACTAAGGTCG
CTGGACGTGGCATCTCAGGTTCTTCCAAAAAACCTCTGAAATCTTAGAAAATTTCTAAAA
TATTACTGGTAGATTATATTAAATTTGTTTGAGTTCATCCCAATGGTTTACGATTTCAAA
GAAACGAAGTTCATTTCATTCCACTCCATTTATAATCTAACAAATGAGCCAATTGACATG
AAAAAAAGAAGAAACTAGAGATTTCTCTCAATGAAATTCAATGGCACATTTTATTAATTA
TTAATAAAATCGTATTCTAACAACTATACTTGTGAACAATTAATGTTGTATCCCAATGCC
CCAGTCCGTCAGACTCGGTGGCGCAAAAGTTAGAAAAAATCGTTTTCTGTTCGTCTGGGT
GTCGAACTTCGGTATAGGTATTTATTTAACTCTATAAACACGTATATTATCAGTTTCTAG
TTCCCATAGGAACATACAGGGACTCCTGATTTGTGGCCAGATCGCAGTCACTTTTCCTCG
GTTTTTTGCTATTTATTTAATATGAGTTAGTACATTATTCCCTTTGCGACTTTGGTCACT
GAACCCTTACACCGTATTTAAAAATAATTGATCTATACAAAACATACTTTATTTTAGATA
TTGTCAAATGAAAAACAGCCACAACCACTAACTAATTAAGTTAAATGAACAGTAAAAGAC
TTATAGTATGCATATTGTAACTGCTATAGTATCAGGCGTAGACGAATAACTATTAAAAGG
CCTCTCAAATATGTTATTGCACTAATGTCATTAACGACAGTGATCTTATCATTTGTTTTA
GTAAAAACAATTTTAGAAATTGCTGGAAGCTTTACATGACGTATACTTTAAGCTTTGGTA
TTATTTTGAATATCGGTTTAAACAATACTTTCCAATACGATCAATATCTATAAGATGTAA
GATACACCTAAATTTTCTAATTATTAAACATTTCTCTTAGTATACTGATATTTTACAAAA
ACATTAACATCCGTATTGAAGCTACTTTATAAAGTAATAATTGACGACGGTGAAGCTAGC
GGTCTAAGATTGTTTTATTAAAAAAAAAACATTTAAAGTCGACGCTCTGCTCGATTTTAA
TCAAAATTCTAAAGTGGTCTCTTTGAATAACTTCGCATAATAAATAAATTATCTCGAAAT
TTTCGTCGGATTTTAATAAAAAAAATTCCATGTACACTTCTCCTGAAAACTTGAAAAGAA
ATCTTGAATCATAGACCACTCGGACGCAGTTACAGCGAAAATGCAAACCCACAATTAATC
CTTAATATAAACTTTAGTAAATAAAAACAATTAGGCATTAGATGTAAGTAACTGAGACTA
CATGATATTTATCGGTTTGTTTATAGAAACGATACACTATGTACCTACATGGACTGTGGG
AGTCCTTTCTGCATAAGTACGTCCGCAACAGCTTTCCATCGCCAATTATTTAAATTGGCA
AGTTTGGCAATTCAGGGCAAAGGCCAAGGAAGACCTGAAAAATTGATCGGCCCTCCGAGA
CCTGCGTCCGCTTCTAGAAGACTCATGATAACTGCCATTGCTGCTTCACCATTGCCGTCC
ATGACCAGGGGCGGCAGCGGGGGGGAAGGCAGCGGGGGGGAAGGCGG
(2207 bp)

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