SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp122865_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		Nep1_protein_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0009267 P cellular response to starvation
GO:0016740 F transferase activity
GO:0019843 F rRNA binding
GO:0022008 P neurogenesis
GO:0031167 P rRNA methylation
GO:0032040 C small-subunit processome
GO:0032259 P methylation
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
GO:0042742 P defense response to bacterium
GO:0070037 F rRNA (pseudouridine) methyltransferase activity
GO:0070475 P rRNA base methylation
Transcript
Level		FPKM:4.71 TPM:3.72
ORF EntryO_BomoMG27972_complete:A_BomoMG_comp122865_c0_seq1
Sequence
(Nucleotide)
ACGGAATTGAACTTTAGAAGTTAATTTTGTTTTCGAAACTAAATACTTTCCTGATGACGG
TCGTAGTATATTGCTTTAAATAAGTCATAACATTGCAAGGTGCATTCTAAAATGGGTAAA
AAAAGAAAATTGGTTTCTAAAGATGATGATTTTGAATTTGATCCGATTCCTAAACATTTG
GTTACTTCACACATAAAAAAGCAGGAAAAACGTCTTATAGTTATCCTGGAAAACGCACAA
CTGGAAAGCGTGAAAAATGGAAATAGCTTTGAGCTATTAAACTGTGATGACCATGGTCAC
ATTTTAAGAAAAAACGATCGTGATCCTGGTTCTTGTCGCCCAGATATTACGCATCAGTCT
CTCCTCATGTTGATGGACTCCCCGTTGAACAGAGCTGGCTTACTGCAGGTCTATATTCAT
ACAGAAAAAAATGTTTTAATCGAAATTAATCCACAAACAAGAATACCTAGAACATTCAAG
CGTTTTGCTGGATTAATGGTTCAACTTCTACACAAGTTTGCAATTAGAGCATCAGATGGG
CCAATGAAACTTTTGAAAGTTATTAAAAATCCTGTCACGTCACATCTACCAGTTGGAGTC
AAGAAAATTACTATGTCTTTTAGTTCTAAAATAGTTCAGAATTGCAGAGATCTGGTCCCA
AAAGACGAACCCATTGTGATGGTCATAGGTGCAATGGCTCATGGTAAAGTTGAAGTAGAC
TACTCTGAAGATGTCATATCTATCAGCAATTATCCTTTATCAGCAGCATTGACTTGTGCT
AAACTTTGTTCAGCATTTGAAGAAGTTTGGGGAGTAGCATAAGTGTTAAATTTAATTGTA
AAATAAACC
(849 bp)

- SilkBase 1999-2023 -