SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp119608_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		Cohesin_subunit_SA-1_[Papilio_xuthus]
Ontology
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005886 C plasma membrane
GO:0006366 P transcription by RNA polymerase II
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0019827 P stem cell population maintenance
GO:0032876 P negative regulation of DNA endoreduplication
GO:0045111 C intermediate filament cytoskeleton
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
Transcript
Level		FPKM:6.32 TPM:4.99
ORF EntryO_BomoMG27952_3prime_partial:A_BomoMG_comp119608_c0_seq1
Sequence
(Nucleotide)
GCGCGGGCGCGGCGGGGTCGGCGCGGAACAGGCGCACGTTGAGGAACTCTCCGGCCGCCG
CCGCCACGCCGCGCCACGACGAGTACACCAGTTCGTACACGTTCTCGCAGTCCTTGTCCG
TCAGCACGTCCGGGTGCATCTTGAGAATAGCTATAACCAACTTCACAGCATGCACGGCCA
CATCAGTTTCCTTATCGAGGGTCATAGAAACTATCCGATCTTTGAATTTAGACGTGAAGA
GTTCCAGTTTACCCTTCAACTCCTCACATTCATATAGAGGTTGTAGGGCTTGCAGACAGC
GAAGACGCACTTCACCCACCTTATCATGAAGTGTCCATCCAATATATTTTAAATAAAGAT
CATCAAGGAAATGAGCTGGAAATTTCTCCATCCAAATGCCAATCTCAGACATAGTTATGG
CTCTTATATCTGGCAAAGTGTCCCTGTATCGATGGACAAACACAGATTTAAACATATAAG
ACAGCATATTCTTAATCTCCTCCATGTTCTCCTCTAGTTCTTGACGTTTAGCCACCAGCA
CTTCAAGGCGTTCAGTGGCCCGCTTATCACGTGCCTTCAATCTTTCTGCTTCATATTGCC
GAAGACAGTTGTCACAATTTACACTAGTTAATAACGCCACATCAACTAGAGCGGTCATTA
GCTTCATTACAGCTAATGTCGCAGTGTGACGGAAAGCTCGGACTTGTGAGTCAGACAGCC
CAGTGAGTAATGAAATGATATTGTCCATTAAATATTGATCATAGATGATGGAGTATTGGC
ACATCTTTACCAGGGTCTGAATGAACTCACAAAAGTTAGAACGGAACTTTTTCCAGGTTT
GACCAGTCATTATCAGAGGATATTCACCACTTTCCTCATCAAATTCCTGTGTCATTTTTT
TTATTATTAGTGTGTGATCCATCTGTGCCATATCTGGAGAAACCTTCCCTCTGCAACCGG
AAGAGTTGATGAAGAACTGCATCAGTTGAACTAAAGCCACTTCACGATTTGTTTTGTACT
CCTCTATCCATTTGTCTACTACTTGGTTTATTGCGGTCTTGTTGAACCTCAAAATATTAT
ATAAACTGTTTTCATCATCTCCAGGCAGGAGCACCGGGGGTGGAGAATATGCTGGAGGTG
GAGCGGCACCTCGTCCTCTGCCACGACCACGGACACCGCGGCCTCGACGTCGTATAGGCG
GTGGCGGCGGAGACTCCGCCAATCGCCCCACATAACCACCATCTGCGCGTCTACCTCGAC
TTCGAGTCACCCGCTTGAGGGTCGGAGATGGAGACCTCGGTTCCTCTTCCTCGTGATGCG
ATTCTTCAGCTTCCTCTCGTGGCGCTTCCACTGCCGTCGAGTTAGCTACTGCACCAGTAT
TAAAGCCACTATAGTTCACATTAGGCGTTTCAGGTTCATGGACAGATTGGCCACCATAGT
CCGTCATAGGAGTAGCCGGAGTCATAGGATTTACATACTCCGGTGGAGGATCGTCCATCC
GTATACGTTTCCCGCCTCGACGATGCATCTTCAATCGATTTACTTCTAAAAAAAAACTAA
AAACTAAGCTATCACCACACTTTTTCTCACATGAGTATTTTATATGGACACTAAAAAAAA
CCAAATTCCGTTGTTTGTTGTATAATTCGATTTTATTGAATTTCGAAGCAGCACAACCAA
GACACCATTAATAAATGAGTAAAAGAGAGGGAACAAAAACTATCGATCAATAAACGACAA
AAG
(1743 bp)

- SilkBase 1999-2023 -