SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN33796_c1_g2_i8
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		uncharacterized_protein_LOC110384711_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001172 P transcription, RNA-templated
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006351 P transcription, DNA-templated
GO:0006396 P RNA processing
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008174 F mRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032259 P methylation
GO:0039694 P viral RNA genome replication
GO:0080009 P mRNA methylation
Transcript
Level		FPKM:0.22 TPM:0.12
ORF EntryO_BomoIG10851_3prime_partial:A_BomoIG_DN33796_c1_g2_i8
Sequence
(Nucleotide)
AAGTCTGTTCTCGATCAGTTCTCGCCATTCCGGAAACGCACTGGTTATTATTGACGGGTA
TCTAACTTCTGCATTATTACGTATTTCTTCTGGATGGATTTTTGCACTGCAATTATCTCG
TGATACATCTGAATGACGATTTAAAGCATTTAAAGCGTTTAAAGCCTGAAATTGTTTTTT
CCTATCGTAACATTCTTTATTTCTTTGTTTAGCAGTTTTAGGTATTTTTTTAATTTTTTG
TTTCTTTAATTTCTGCGCTTCATAATATTTTCTTCTTCTTTCTGCATCAGTTTTAGGTTT
TTTGGCTGGTAATTGATCAGTCTCACTACATTCATCTGATCTCTCTGCAGTTATGTTTTG
TACCATTGTATTTTGTAATTTCTTTTTCTCACGATATTCTCTACATTTTTGTGCATTTGT
CTTTTTCCTTTTCCTTGATGTTATAGTTTGTACCTCAGTAGTCGATGCTTTAGTTGATTC
GTTCTGGGCCACAGCTCTCTGTAATTTGGTTGGTCTTTGTATAGACTCGGCCGACGAAGG
AGAGTTCTCGCGGGAGGCGTACCAGTACTCATATAGCGATTCCCTGGTCACCTCCTTCAG
CTGATAACAAAGCTTCTGCAGTAGCATCGGTGAGCACTGATGACCCCTCGAGTTGTAGAG
GGCGGTGGCCGCATTCTTCAGCTTGTTGAGTACTACAGTTTTCATGTGGTACCTGTTAAT
CTTATACCACGGGAATCTGTTAGTTTCAAAATGAGTATTCATATTTCCCCTGAGTTCTTC
ACTTGATTTCATTTCTTCTAACAGTTGGTTCTCCAAAACCAATAAATGATTCTTTTGATC
TTTAGAGCTTTCCAATGCAGGGTTGTGTAGAATATCTTTTGGAACAGTATCTCGATTGAA
TTGAGCAATACAATTGAAATCAGGTATTTCAATCGGATCATCATGCGCCGCTCCTAATAA
TTCTTCGTCTTCTTGTTCTTCATCGTTTTCTCGGCACAACTGTGTACAAATTTGTAAAGT
TTTCTCTATGTCCAAATTTGATTCAAATTCTTTCTTACGTTCTAATATCGTATCTTTGTT
GTCCTCGTATATTTGAATAAACTTATTTTCAGCGATAATATCATTTTCTTCACTTTGAAA
TGGAACATGCAACAGAACCATCTCACGCCTATAATCGTTGTAATTTTCAGCCATATCGTA
GTTCTTATATCTTATTATTCTTGCAGTATCTCTTTTACTGTAAGTCCCCTTTTTATTTAT
GTAATATTTTGCAACAAATTGTGCTAACGTAACATCGCGGAGCTCTTCAGGTCTTTTCTC
GTACTTATCGAACCAATTCTCTTTCCCAACGTTCGTACAGTCATCGTCTAAAGCTTCAAG
TTCCTTCATAGATTTTCTAATTCTTGCGCGTTCAGTAGGCAATACCGTTGGAATGTAGAC
TGTCGCCACCGATGACTTAGCCACAGGTTCTCTTAATAAATACCAAGCAGCTTCTTGTGC
CGACATTTCAACAGACTGAAGTATGTCAATACTCATTTTGTTCGTAATATCGACAATGTC
GAATTCTGGATTCTCGTCCATTATGTCAATTATTTGTCTTTGCAAATTACTAATCCCTCT
ATTATGCTTATTGGCATATTCAACAACATATGTTGCACAAGCATATTCATCTAGTATAAT
CTGAAAGTCCATGTTCGATTTAAAATGATGTAATACGAACGGATTGAAAGAGTTGTGCCA
TTTTTCTGCTGGTGTTCTTTTATAGAATAATTTTGGTCTATTGATACCAGCACGAATAAT
ATTGTAGTAATGATCATCAGAAATAATATAATTATGCGAGTAAAATTCATCAAAATTCGT
GTAGTCAAAATATTCGAGATTATTTCTTATAAATTTAAATCGATTCTTATATTCTTTGAA
AAGTGCTTCTGAGTAATCGGGATCAGTGTCTTTCATAGGTATCAAATAAATAGTTTTTTT
TGTTGGCATAAATGGTGCGCCAAATCTACATTCTTGCTTTTTATTGGGATTCATTTTTTT
ATAACACGTGGATGTGTGTTTGTGTGTTACTAGTTTTATATTTCCAGACGCCTCTGACGC
TGACACAGAAACCAATTCGTCAATTAATTTAATTACTTCAGGATCATTGCTTAATAAATC
TTCAGGAACATTTTCCAACCAAAGAAGAATATGTGCATGTGGGCTACCAAGATGTTGAAA
TTCTATTCTTTTGAAATAATGTACTACTCTATGTTTTCCGAATGGACTTCTTTTCTTTGA
TTGCAAAACTTTTAATAGACAATTTACCTTTTTATTAAAATAAATAGCACAAGTTACGGC
ATCTTCATTCACAAGTTGAGCTTTATACATATAACTCATTTCTGCTAAAAACTTATCTGA
AATTTCCGCCCCCTCGTTTTTCAATTTGTACAATAATTTCAACAAATTTTCCCAGCCGGT
TTCATTGGCGCTTAGACCCATAAAAGCAGTTGGTGGGCCTAATTGCCTGATCATTGCAAA
AAGATCTTTTTTGCGATCTGACCAAAACCAAGCGGAATTTGGTATGCAGCGAAGGAATGC
GAGATTTGTTTCTAAACAATTATTTATATATTCTTCGGATTCAATGGTCTCTTTCGTAAT
TGAAGTACCTTGTCCGACATGCTTAAACGCAACGTTGACACATCCACTAACTCGCAACCT
CATGATTTTAGCAGCGATGTATAAGAGGTGTTGTGGGTCAGTAGCGCGCCTATCAGTACG
CCGGAGTTCGCTGGTAGCTTGCATGAATGGAGTAACAGTAACACCATCTCTATATGTTCG
AAACTGACCGCCGTAGATTGTCGGAAAAGATAATTCTTCCGCATGTTCATCTATTAAAAT
ACTGGCTGGCCTGTTATATTCACCGGGTGCTAGACTCAAAAAATAATCATCATTCCACAA
AAGAGTTTGTTGCTGCGCAACTAAATTGTCTTCAATTGGCACGTGTTCACTTATTTCATC
CATATTCAATTGCGAAGTACGTTCATTGTCGGTAAAAAAAGACTCATCGATTTTAATGTC
ATGATAAATATAAAGAGGCGTAGATACTAAATACGACAACCACTCTTCAATATGACTCTT
ATTCACAAGCCCGTGGACATGACTAGTTTTGTGAATCAACTTCTTTTTCAAATGCACATA
AAAGCAATGGTCGTCTTGAATGTTTCTTGGCAATTGTTTCACCATTGTATCGACTTCGAT
AGGAACATTAATTATCTGGGCGTAAATACCATACTGATCATTAACGTGTCTCAGCCTACG
AATTTGCATGAACGCTAGTCTCGGTGAAATCAATCGTTGCTCGATAAGGTTTAACGTTGG
TAAATGTGATGGAATTTTCGGATATGCAAAACCATTGTAGGTTGACATGAGAGGAATTTT
TTCTTTTTCCAAAGATGTATAGCACGTATAGCAGACTTGAACTATTTCACCAGGGGTATA
ATTCTGCAGGATTGTTTTCAAAATACTCTCATGTTTACTGGTCGACATTTTCAAGTCTCT
TTTCCACCATAGTCTGTCGCAAATAATACAAGAATGGCCAAATGAATTACTCGTAAAGTC
TTTATAAAAATCAATATGACTTGTGCTGTGTTTACGATAATTTGTGTAAACTGGAGTAGT
ACCATCAACAATAAAATCCATAATATTTTCACCAATTCGATCTTCTCTATCAATCTCAAT
TTCATTTTCATGATTGTTATGGTTGTCTTCGGTAGCATCTTCATCATAATTATCACGCAA
TAGTTGAATATTGGCATCAACATGGGCTTCATTTTGGGTAGCGTCTTTTATTGGCTTCAA
TAAATCTGATACTTCATAAAAAGGTGTGAAATGTTGTTCACGAAGATGAAGATGAATCCA
GTTTTGTGTATCATTCGCTTTAAAATGCCAAAAGATAGTGTCTTCATTCTTTGTAGTTAT
GTTGTAAAAACAATAATGTACACAAACATTTTGATTGTACATTTTTGAAAATAAGTACAA
ACAATCCAAATCTCCGTAATCATTAGTGCTTGATAGAATCTTATATGCTTCTTGCGGATT
GTGGCAGGAGTTTAAATAGGGTGAATCGCGTAACTGATTTCTCAATTCACAACTCTCAAT
TTGAAGTTGCAAAACACTTATGAGCGAGTGGAATAGGCAATCGCCATCGCCAGGAATTCC
CGTGTTCCTGTGTAGAATAACTTCGGGAGTAATGCATTCATTACGCTGTTCATAAATTTG
ATTTTCCTGTAGCGTTACATTTTCTGTATTTTCAACAGCCCTATCTTGCACGACATTCTC
TTCATTACTGCACAATTTTCGTCTTTTCATATCCACGTAGGATTTTTCTGCTTTACGTTG
ACGAAATTCCCTTTGACGTTCAGCATTTGATTTTGGTGGTCTTTCTTTTTTTTTTCGTTC
TTTTTTTATTTTATTTTCATTTTTCTTCAAATCTTTCTGACGGTGATAATATGCCCTTTG
ACGTTCACGATTTCTTTTTCTTTTTAGCTCTTTAAGTTTTTCTTCTCTATAAAACGAAAA
TAGCTAGGTATAAATAATTAGGTATAACTAGTGTAATTACACACTAAAAAAAATATTAAT
TAAAAAAATTTGAAAAAAAAGTACGATATTAGGAGTTTGATTAACCAATATCACGCAATG
TACATTTCTACACATATAATATCATATAAACTTTCTCTGCGCGGCATTAATGTGTATTAC
CTATATACAAAAAAAAGTACCTCTAAAAGTACATCGAGTCTAGTCCAAAATTTTTAACGC
AAAATTCGTTTTTATTTTTATTCGGTAAAAAAATCGTCCCAGTTCATTGACAAATAAACA
TATTTCGCTGGCGTCCGTAATAATATCGTTCTTTTCTAGAATCGGTTAAGACCTAAGTCC
TTCTAGATCTAGGCCGTTCCAAAATCTAGTCCTGTTAACATTTAAGGACGTCAACACTGA
ACAACTAGCACTAGAAGGGCCTACTGGAAGAGATTTCAACGTGAAATAAGTAGTGCCCTT
GTACTCTGTATCCTTATTGTCGTGTTTTTTCTAACAGCTGTGTGTACAAAACATATTGAA
TAAATAAAATCACGATGTGAAAAGTTACCACTTAATT
(5137 bp)

- SilkBase 1999-2023 -