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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN33739_c7_g1_i3
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_voltage-dependent_T-type_calcium_channel_subunit_alpha-1G_[Bombyx_mori]
Ontology
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005891 C voltage-gated calcium channel complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0008332 F low voltage-gated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0030425 C dendrite
GO:0032342 P aldosterone biosynthetic process
GO:0034651 P cortisol biosynthetic process
GO:0034765 P regulation of ion transmembrane transport
GO:0043204 C perikaryon
GO:0045956 P positive regulation of calcium ion-dependent exocytosis
GO:0046872 F metal ion binding
GO:0055085 P transmembrane transport
GO:0070509 P calcium ion import
GO:0070588 P calcium ion transmembrane transport
GO:0086010 P membrane depolarization during action potential
Transcript
Level		FPKM:3.43 TPM:1.91
ORF EntryO_BomoIG10596_complete:A_BomoIG_DN33739_c7_g1_i3
Sequence
(Nucleotide)
AGTCGGTTTTGTTCTTAACGTTCTTTATGTTCGCGCCTTCGCAATAGAAGAACGCTCCTT
TGAACAGCTGGACTCCTAAAATACCGAATATTATGAAAAACGTGCAACAAATCAACACGA
TGTTTCCGATGGGTCTTAAAGACGAAAGTAGCGTTTGAACCACCAGCTTCAAGCCGGGAG
CTCTGTTGATTACCCTTAACGGCCTTAAAGAACGGAGTAATCTGAATACCCTGAGAATTC
CGAAAATCCGTGGACTTGATTCTGATACTAATGACATTAATAAATCAATGATTGATATGA
TCACTAACGAACCGTCCATTATGTTCCATCCTGATGTGAAATATGCTTCGTGCCCATAAA
ACATTCCTGATGCAACCACCTTGATGAACATTTCAATAGCGAAAACAGCAGTGAATACGT
AATTGGCACTTGATAAAAACTGTCTCTCTTTAGAATCAGGCGGTATGTTCGGGCGTTCCA
TTGCAAGTGTGATGCAGTTTAATGCGATAAACAGTAAGACGATATTGTCAAACCAACTTC
GGGTCACTATCCATACGCAAAAACGTCTCATTTTGTTTTCCGGAGCGAAAATATAAAGAG
AGTAATGTTCTTTCTCTTTGAGGCATCCAGTTGGCTCCATGAACCGGAAGAGATCTTTGA
ACCTGAATTGTCTTCTGTCGAAACGTGATGAAAAGATACACACGTTGTTGCTTATCGTTA
CCTCTTCATTAATCTGCTTAATGAGTGGAAGGGGTTGATTATTAGGTCTTGTCGGTAGCG
TGGATACTTCGTTCCTCGGAGTCCGCGGTAACGACGGAACTCGGGATATTGTCGCAGGAG
GCGGAGTCAAGTTGCTAGATTTCACTTCCGACACTGTTGTTACGGTTATGTAGTCATTGG
TTAGTGATAGTCGGTGTGGTTTAACCGCGTCAAGTCGTACAGTCGAATCCGAGGAAAAGC
CTGCTTCCGGAGCCTTCCATGAAACATCAGGTAATAAGGGAGCGTTTTGCGCAGATACTT
TCATGGCTGGTGCAGATAATACTCTGGGCGCGGGAAGTTGTGAACGAGATCGGTTGTTTG
GGTATTCCGACTGGGTGTCGTTCTTGATCACTATCGATGACGACAGAAGCAGCTCGTTCT
TCCTAAGACCTGATCCGTTACAAACAGCGTGGTCTCTCCCATTGTTCAAGACAATCGCAT
CTGAATCAGATCCGGTCCTCTGTTTCGGTTTCCTTCTCAGACTTGGTTTGGAAAGACGCC
AGCTATATCCTCTTTGTACTCTGCATTTGTCCTCACCGTTGGCTGTAGTACTAACTATAC
TTATATTCTTTTGTGAACTCAGTAGACTAGATTTGTCACTCGTGGTCAAGCAATTCTCGT
CTTTGGCTATTGTGACCTGTAGATTTTTTTCTGGTAACACTGGAGACGGCATTGATTTTG
GTGTGGTTGGAGTTGTGGGACTCGGTGAAGAGGTCCGGAGCGGTGGAAGAGCGAGGGTTA
ATGGAGGAGGCGCCAGTGTTAACGGAGGAAGTCTTGCTTTCTCAGCACCGAGTTGAGCCT
GAGCTGAATGGAGTGTGAGCGTGTAGCTATTCGGTGGTTTGAGTAGTCCGGGAATACTTG
CGCAAGATGTTCGATCGATTGAATCTAAACTAGAGAGCATGGATGATCGCTCCAGACTCA
AAGTCATATTGAAATCTCTAAACGAAGCTCCCGGTTCCAAGGTTGTTGACGGTGAGTCTT
GTGGTGTAGCTGCAGTGTGGGTTATCATTGGAACTGCTGCGGATTCAGCTACTCCTGCAT
TGCTTGCTAGCATCTTTGATTCCTGGGAGAAACTATCGCTGGAATGCGATGCCGAATTAG
ACTCATCGTATTGTAACTCATTGTTTTCAGAGAAACATTCACTTGATAATTTAGACTTTG
CTAGTTCGCGTTGCTCACGTTCCCTTCTCTCATTTCGCTCCGAACTGAATCCTTCAACCA
GTATAGCTACCAATAAATTAAACAGTACGTAATTCCCGAAAGTCATAAGTGCAACGAAAT
ATAAAGCGGCCCAGTGACTTGTTTTCTCCATTCCGTTGAACAGTACAACGTTCCAGTCTT
CTTGAGTTAATACCTGGAAAACGGTGACCGTCGCCCAAAGGATGTTATTAAAATGTTTCC
TGTCGCATTCACACTTGGGATGATGCGAAACAATCTCGGGGCAGGTGCAATCACGCTCGG
CGCCATTGTCCTCGACGTACTTGCAAAACTTACCACCGAATAGATACATGCCCAGTATAC
TGAATATAAAGATGAATAGAACAAGCAAGGAGAAAAATACTGCAACGTTGTCCATTGTCC
TCAGCATTACAAAAAGCTGTCGCCTCAAGTTCGGCATGAAGCGTACCAGTTTTAATATAC
GCAAGAGTCGAAATGTCCGAAGCACCGAAAGACCAGAACTTCCTGCCAAGTCCTTTTCGT
TACCGTAGCTCTGTGCTAGCTCGAACGCACTGAGAATTACAATTATCCCATCGAATACGT
TGAATCCGTTGGAGATATATTTAAAAGGGCCTTCAGAAATGATCTTGAAAACCATTTCTA
TAGCGAATATGGCCGAGAACACAACGTTACTGATCTCGACTATTACAGTGAGCTCCTCGG
GTTGATTGTGGTACTCAATGCCCATTGATAGCGTATTGATCAGTATAGCTAACAGAATAC
CTTGTTGAAAGTATTTATGATCGGCAATTTCCTTTATACGTTTTCGTTTATCAGAAAAAA
AATTGGAAAAACTTTTCCAGAACTTGCAGCATGCGTTTCTCAATCTGCCTTTTCTAGTTT
CCTTAGCTGCAGCTTCGGCCATCAATAGATCAACACAGCAAGAAAAGTCTTCAATTTCTA
TAGTTTTAGTGTCTGCTTTATCTTCACCGGCCCTCTTACTGATTCCCTTTGTAAGTTCTT
CGAAGAAGGAATCCAGTGCTACTTGTCCAGTAGGTAAAGCAGCTGACAATGCTCCAGACA
AAGCAAGTAGTTCTTGGCAGGACATAGTACCACCTGCAGCTGCTCGTTCTTCAGCTGTGT
CTCCTGCTGGCAGGTCAAATTCTGTTTGAGTCATCTTCTCGGAAGAGCATACGTTATGCG
GATGAGCCACGTGCTGCGCGTTCGGCGTGTGCAGTAACACTGTGTCGCTAAACATCACCG
ACGATCTTCTTCTTATTAGCGATGGAGGTGACAACAGCGAGAGATTTGAAGCGTTCTCAA
GATCGGCTGCGGATAGTGAAGGGACGCGCAACAGACTGGGTCGACTCAGGGGCTCCTCGC
CACCCTCTTCAACACCCTTACCGTTACCCTGTGGATGCACTCGTGGACAGCAAGGGTGAT
GCTGTCTTGTTTTGTTCGATGGCAATTGTAGTGTCTCCCGACTTGTTCTCCATCGGAGCT
GAGCGCGTTGATATCGATATACCCTTATTTTTTTCATCATTCGTCTTTTGAATCGCCTCC
ACAGATGCGCAACGTATTTCACGATTTCCGCGTAACAAGTCGCCGGTTCGCTGTTGTTGG
TAGACGAAGCGAGGGTCGAGGACGATGTGAACCGTGCTCGTTCAGCTCTCATACGTTCCA
TTTCACGTTTCTTTGTTTCACTGAACTGTGTCGCGATCACGACCAGGCAAAGGTTGATCA
TAAAGAATGACCCAATCACGATGAGGAGCACGAAATAAATCCAATCCCAGAAACTGTGAG
CGTCTTGTACGTAATACATTATATCTGTCCAACCTTCCAAAGAAATGACCAAGAAAATAG
CGACCCACGCAAGTCCGATGTTATCAAAGGAAATAGTCCCTTGGAATGGATTGGCTCCTC
TCTGAGTACAATTAGTGTAATACTGATTCCAGTTTACACAGGAAGCGTTAGAAGGTCTAT
TATATGAGAAAGGCTTGGCCGTCTCATTACATACTAAAGGTCCGTATCTGTAGGGAGGAA
AGTCTCCGCACTGGTGCATTCCGCTATCCTCTGGTGTCGTGCAAATGTAATCCAGCTCTT
TAGAGAACTCGTAGTAAAACGAAATGCTGGAATGCAATTCTAAAATTTACATCTGTATAT
AAAATAAAAAATGTCGTTCTTATAGTCGGGCGCGAGACGAATTCGAGTTAATGATAAATG
AGCTCGCTAATGAGAAGCAAAAGGGATGATGTTTTATTCAAAAGGGTGAATACTAATGAA
CTGTTGCCGTCCGTTGTATTCGTTGTAAAAACAGACTCTTTGGTTGTAAACAATCATGTT
TTTTTTTTTTTTCGGGCGTTTAATGCTATTATTAGATTTACTTGTAACACAACATCAAAT
CTACATACAGACACATATAATTGTATGAGTGAAAACACTAATCTATATAGGTATTCTAGG
TGCGAAAGCGGTCGTGTTAAAAATAATGCTTACATTTTTAAAACCTGTGGCTCACTGTTT
ACGTTTTGAAGAAAACGTTTTCAACAAACTAGAGTAAAACACATGCGGATACTAGAGAAA
ATGTAAATAGCATGCGAACAAACGCTTAGTTAGAAGTTGGTCAGGTAGGTAGGTATAAAG
ACTATATTGGCTATTTCAATTAATGATAATGGTAGCGCTAATAAAGGTGGCTTAGAGAAA
CTGAGAGGTGGATCGGAGAGATTAACGTCAGTGGTCTTTGTGCCGTTATCGTTTACGATA
GGGTCCACATGCTTCGGAACACGGACACGCCGACCCTAACTCACGTCGTTTGGGACACCC
GGTCATTTCGGGACTCGTACTCTTCATGACACTCATAAAGGTTTTTATTGTGGTCTCCAA
CATCAATATAAAACACGTTTCAAGAAGCTTTTTTTAAGATACCAATGCAATCGCTTAACA
AAATGTGATGTGAATTCTCAATGGGAGTATGAATGTTAGTCAGATTAATTTGTCTATGTT
CTGTGAACCTACAAAGTATTATGTGGATATTAAAGTGTGTGTGAATGTCCATTAGATTGT
TCGGTAATGAATGGTACAGTTCACGAGAGTAGGATCATCTCTGAAACTTCTCGACCAAAA
GATAACTCGATATTTAATTACGTTTTTATGGCTTTGAAACTAATACTTTCAAGAGGGACA
GCTGTACATTTTCATAAATCATTTACAGAGGAAGTTGAAGAAACTACCGATAATAACGTA
TCGTAACAAATTGGCAGTTCATAAATATGGTTAGTTTCGTTTATTTTTTCAC
(5212 bp)

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