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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN33739_c7_g1_i24
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_voltage-dependent_T-type_calcium_channel_subunit_alpha-1G_[Bombyx_mori]
Ontology
GO:0001508 P action potential
GO:0002027 P regulation of heart rate
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005891 C voltage-gated calcium channel complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007268 P chemical synaptic transmission
GO:0008332 F low voltage-gated calcium channel activity
GO:0010045 P response to nickel cation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042391 P regulation of membrane potential
GO:0045956 P positive regulation of calcium ion-dependent exocytosis
GO:0055085 P transmembrane transport
GO:0060371 P regulation of atrial cardiac muscle cell membrane depolarization
GO:0070509 P calcium ion import
GO:0070588 P calcium ion transmembrane transport
GO:0086010 P membrane depolarization during action potential
GO:0086015 P SA node cell action potential
GO:0086016 P AV node cell action potential
GO:0086018 P SA node cell to atrial cardiac muscle cell signaling
GO:0086027 P AV node cell to bundle of His cell signaling
GO:0086045 P membrane depolarization during AV node cell action potential
GO:0086046 P membrane depolarization during SA node cell action potential
GO:0086056 F voltage-gated calcium channel activity involved in AV node cell action potential
GO:0086059 F voltage-gated calcium channel activity involved SA node cell action potential
GO:0086091 P regulation of heart rate by cardiac conduction
GO:0097110 F scaffold protein binding
Transcript
Level		FPKM:3.22 TPM:1.80
ORF EntryO_BomoIG10656_complete:A_BomoIG_DN33739_c7_g1_i24
Sequence
(Nucleotide)
AGTCGGTTTTGTTCTTAACGTTCTTTATGTTCGCGCCTTCGCAATAGAAGAACGCTCCTT
TGAACAGCTGGACTCCTAAAATACCGAATATTATGAAAAACGTGCAACAAATCAACACGA
TGTTTCCGATGGGTCTTAAAGACGAAAGTAGCGTTTGAACCACCAGCTTCAAGCCGGGAG
CTCTGTTGATTACCCTTAACGGCCTTAAAGAACGGAGTAATCTGAATACCCTGAGAATTC
CGAAAATCCGTGGACTTGATTCTGATACTAATGACATTAATAAATCAATGATTGATATGA
TCACTAACGAACCGTCCATTATGTTCCATCCTGATGTGAAATATGCTTCGTGCCCATAAA
ACATTCCTGATGCAACCACCTTGATGAACATTTCAATAGCGAAAACAGCAGTGAATACGT
AATTGGCACTTGATAAAAACTGTCTCTCTTTAGAATCAGGCGGTATGTTCGGGCGTTCCA
TTGCAAGTGTGATGCAGTTTAATGCGATAAACAGTAAGACGATATTGTCAAACCAACTTC
GGGTCACTATCCATACGCAAAAACGTCTCATTTTGTTTTCCGGAGCGAAAATATAAAGAG
AGTAATGTTCTTTCTCTTTGAGGCATCCAGTTGGCTCCATGAACCGGAAGAGATCTTTGA
ACCTGAATTGTCTTCTGTCGAAACGTGATGAAAAGATACACACGTTGTTGCTTATCGTTA
CCTCTTCATTAATCTGCTTAATGAGTGGAAGGGGTTGATTATTAGGTCTTGTCGGTAGCG
TGGATACTTCGTTCCTCGGAGTCCGCGGTAACGACGGAACTCGGGATATTGTCGCAGGAG
GCGGAGTCAAGTTGCTAGATTTCACTTCCGACACTGTTGTTACGGTTATGTAGTCATTGG
TTAGTGATAGTCGGTGTGGTTTAACCGCGTCAAGTCGTACAGTCGAATCCGAGGAAAAGC
CTGCTTCCGGAGCCTTCCATGAAACATCAGGTAATAAGGGAGCGTTTTGCGCAGATACTT
TCATGGCTGGTGCAGATAATACTCTGGGCGCGGGAAGTTGTGAACGAGATCGGTTGTTTG
GGTATTCCGACTGGGTGTCGTTCTTGATCACTATCGATGACGACAGAAGCAGCTCGTTCT
TCCTAAGACCTGATCCGTTACAAACAGCGTGGTCTCTCCCATTGTTCAAGACAATCGCAT
CTGAATCAGATCCGGTCCTCTGTTTCGGTTTCCTTCTCAGACTTGGTTTGGAAAGACGCC
AGCTATATCCTCTTTGTACTCTGCATTTGTCCTCACCGTTGGCTGTAGTACTAACTATAC
TTATATTCTTTTGTGAACTCAGTAGACTAGATTTGTCACTCGTGGTCAAGCAATTCTCGT
CTTTGGCTATTGTGACCTGTAGATTTTTTTCTGGTAACACTGGAGACGGCATTGATTTTG
GTGTGGTTGGAGTTGTGGGACTCGGTGAAGAGGTCCGGAGCGGTGGAAGAGCGAGGGTTA
ATGGAGGAGGCGCCAGTGTTAACGGAGGAAGTCTTGCTTTCTCAGCACCGAGTTGAGCCT
GAGCTGAATGGAGTGTGAGCGTGTAGCTATTCGGTGGTTTGAGTAGTCCGGGAATACTTG
CGCAAGATGTTCGATCGATTGAATCTAAACTAGAGAGCATGGATGATCGCTCCAGACTCA
AAGTCATATTGAAATCTCTAAACGAAGCTCCCGGTTCCAAGGTTGTTGACGGTGAGTCTT
GTGGTGTAGCTGCAGTGTGGGTTATCATTGGAACTGCTGCGGATTCAGCTACTCCTGCAT
TGCTTGCTAGCATCTTTGATTCCTTTTGTATATTGCATTTGTTTGATTGGGCGCAGTCCT
TGCACAGGGTCGGATGGTGTGAAGATTTAGATTTACGTTTAGTTTTCATCGCTTTATCCT
TGTGGCCGTTTACGTCGTCTTTGGCTTTTCTAACGTCATCGGCGGACCTCCAATAGTTCT
TTATTTCATTCTATATAAAAGGTTACATTTGTGGTCATGGTTATGTTAGTTAATACAAAG
TGTTATTCTCTAAATGATTTATTAGTTGAAGACTAGTGTTTCACTACGTATTCTAATGAC
ATAATATATTTCTGATGTTCACTTTTGGCCGTACGTATTATTAATATAATCGTATAAATA
GCAGTTAACAAGCTGATGTACAGTACTTGAAAATAATAATTAGTGTGTACCTGGGAGAAA
CTATCGCTGGAATGCGATGCCGAATTAGACTCATCGTATTGTAACTCATTGTTTTCAGAG
AAACATTCACTTGATAATTTAGACTTTGCTAGTTCGCGTTGCTCACGTTCCCTTCTCTCA
TTTCGCTCCGAACTGAATCCTTCAACCAGTATAGCTACCAATAAATTAAACAGTACGTAA
TTCCCGAAAGTCATAAGTGCAACGAAATATAAAGCGGCCCAGTGACTTGTTTTCTCCATT
CCGTTGAACAGTACAACGTTCCAGTCTTCTTGAGTTAATACCTGAAACACCGTGACAAAG
GCCCACAAGAGCGTATCAAAGTTTTTTCGGTCGCACACTTGTTCGCCATGCTGGTCTTTC
TCGCAGAATTTGCACCCGAAGAGGTTCATACCGAGGATGCTGAATATAAAGATGAATAGA
ACAAGCAAGGAGAAAAATACTGCAACGTTGTCCATTGTCCTCAGCATTACAAAAAGCTGT
CGCCTCAAGTTCGGCATGAAGCGTACCAGTTTTAATATACGCAAGAGTCGAAATGTCCGA
AGCACCGAAAGACCAGAACTTCCTGCCAAGTCCTTTTCGTTACCGTAGCTCTGTGCTAGC
TCGAACGCACTGAGAATTACAATTATCCCATCGAATACGTTGAATCCGTTGGAGATATAT
TTAAAAGGGCCTTCAGAAATGATCTTGAAAACCATTTCTATAGCGAATATGGCCGAGAAC
ACAACGTTACTGATCTCGACTATTACAGTGAGCTCCTCGGGTTGATTGTGGTACTCAATG
CCCATTGATAGCGTATTGATCAGTATAGCTAACAGAATACCTTGTTGAAAGTATTTATGA
TCGGCAATTTCCTTTATACGTTTTCGTTTATCAGAAAAAAAATTGGAAAAACTTTTCCAG
AACTTGCAGCATGCGTTTCTCAATCTGCCTTTTCTAGTTTCCTTAGCTGCAGCTTCGGCC
ATCAATAGATCAACACAGCAAGAAAAGTCTTCAATTTCTATAGTTTTAGTGTCTGCTTTA
TCTTCACCGGCCCTCTTACTGATTCCCTTTGTAAGTTCTTCGAAGAAGGAATCCAGTGCT
ACTTGTCCAGTAGGTAAAGCAGCTGACAATGCTCCAGACAAAGCAAGTAGTTCTTGGCAG
GACATAGTACCACCTGCAGCTGCTCGTTCTTCAGCTGTGTCTCCTGCTGGCAGGTCAAAT
TCTGTTTGAGTCATCTTCTCGGAAGAGCATACGTTATGCGGATGAGCCACGTGCTGCGCG
TTCGGCGTGTGCAGTAACACTGTGTCGCTAAACATCACCGACGATCTTCTTCTTATTAGC
GATGGAGGTGACAACAGCGAGAGATTTGAAGCGTTCTCAAGATCGGCTGCGGATAGTGAA
GGGACGCGCAACAGACTGGGTCGACTCAGGGGCTCCTCGCCACCCTCTTCAACACCCTTA
CCGTTACCCTGTGGATGCACTCGTGGACAGCAAGGGTGATGCTGTCTTGTTTTGTTCGAT
GGCAATTGTAGTGTCTCCCGACTTGTTCTCCATCGGAGCTGAGCGCGTTGATATCGATAT
ACCCTTATTTTTTTCATCATTCGTCTTTTGAATCGCCTCCACAGATGCGCAACGTATTTC
ACGATTTCCGCGTAACAAGTCGCCGGTTCGCTGTTGTTGGTAGACGAAGCGAGGGTCGAG
GACGATGTGAACCGTGCTCGTTCAGCTCTCATACGTTCCATTTCACGTTTCTTTGTTTCA
CTGAACTGTGTCGCGATCACGACCAGGCAAAGGTTGATCATAAAGAATGACCCAATCACG
ATGAGGAGCACGAAATAAATCCAATCCCAGAAACTGTGAGCGTCTTGTACGTAATACATT
ATATCTGTCCAACCTTCCAAAGAAATGACCAAGAAAATAGCGACCCACGCAAGTCCGATG
TTATCAAAGGAAATAGTCCCTTGGAATGGATTGGCTCCTCTCTGAGTACAATTAGTGTAA
TACTGATTCCAGTTTACACAGGAAGCGTTAGAAGGTCTATTATATGAGAAAGGCTTGGCC
GTCTCATTACATACTAAAGGTCCGTATCTGTAGGGAGGAAAGTCTCCGCACTGGTGCATT
CCGCTATCCTCTGGTGTCGTGCAAATGTAATCCAGCTCTTTAGAGAACTCGTAGTAAAAC
GAAATGTTAGGTCTGAGTACGTTGGTCGGTAAAACGAGTTCACAGCGCTGCCTTAATATT
CCTTCCCACAGCTGGACACCGACTATTCCGAATATAAAAAATACGAAGAAACAGAGTAAT
AGAACATTCCCGAGCATCGGAAGTGTGTCAAGGAGCAGCATTACCAGAATCCGCATGCTC
GGTATCCTGTTGATGGCTCTTAGTGGTCGGAGCACCCTTATAGTCCTGATCGCTGATAAG
TTTATGTTCTCCACGTTCAGTGCGTACTCCAATGCTCCTGCCATTACTATAAAACAGTCG
AGTCGATTCCAGGAGTCGGCGAGATACGTGCTGTGTCCGTACACGCCCATCGCGACCATC
TTGATTGTCATCTCCAGTGTGAAAAACGCGAAAATTATATCGTCGAACACCTGTAATATT
TTACATCTGTTTGTGACGCATTGATCGTCGACACAAGGCTGGTACATCCCAAGGGTCACG
CAGTTCAGCAGGATAACTAGCATTGATATTCTCTCGAACCATGGATTCGTGATGAGTTTC
AAGCACCAGCTCCTTGGCCTTGTGTCTTGAGTCAAATACCGTAGTGCGACAGGAGTGAAA
CCGGGGTACGGCAGGCCCTGGCCCACGGAACTCTCCGTGCTCACCCCTCCTTCCGAATCC
GACTCCACCCCGTCGGATTCCGAGCATCCCCCACTAGTGTCCGATTCTCCCCCGTCCCGA
TACCCGTAGTAAGGCATTTCTCTCGACTTAATTTATAAGCTCATTTTATCACTTGAACAG
TCTTATACTACATCTTAGATGTTTTTAACTATACACATACGAATCGGTTTGTGTTTGAAG
TGAATGTTTTGATCGTTCCGTCACTGTGCTGGCGAGGAACTCCATGATTGAGGTGAGCGC
GAACTGGTAACTCTTTTATCTTTTATTTTTTTTCAAATAGTAGTAATAGAAAAAATAAAT
CGTTCTTCAATTAAAGCACTGCACTTGAGAGAATTTGAAACTTTTTTGTGAAATCACATC
GAAGGGAAAGTATCAAATAAAAAGTCGCAAAAAATTCCGATATGAAAGAAAATTCAGTAA
ACAGGAACAGGATACACTGTTAGTCACTAGTACACTACACTAGTTACAATGTGCATAGGT
TCGTGATTCGCGCGTTGAAACAGGAACGCGCGCGGCGTCCACAATGGGCGGAGGCGAC
(5578 bp)

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