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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN33727_c2_g5_i4
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		ubiquitin_carboxyl-terminal_hydrolase_nonstop_[Bombyx_mori]
Ontology
GO:0000124 C SAGA complex
GO:0003713 F transcription coactivator activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0010485 F H4 histone acetyltransferase activity
GO:0016568 P chromatin organization
GO:0016574 P histone ubiquitination
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0019899 F enzyme binding
GO:0030374 F nuclear receptor coactivator activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0043967 P histone H4 acetylation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045931 P positive regulation of mitotic cell cycle
GO:0046872 F metal ion binding
GO:0070461 C SAGA-type complex
Transcript
Level		FPKM:0.68 TPM:0.38
ORF EntryO_BomoIG10284_complete:A_BomoIG_DN33727_c2_g5_i4
Sequence
(Nucleotide)
CTCCTTATTAGTGAAAATGAAATGATATATTTCTCTGTACTACTGCCCTACATTGGTAAT
AATGTAATTTAGAGGATCACCAAAACAAATATTACCTGAAATAGTTTGGAAACTTCACAC
ACCAAGCATTTGCTAGAACTTTGCGACTTACATTTGTGTTTTTCTGCTAAGAAATAATCT
CTCAGGAGTGGAGTGTGAATTAGTGTCTGAACAATGCAGTTCATGAAGCATGTTGATCCT
AGGTTCTGTAAGCCCCGTAAACCTATTGTAGTATGAGGACTGATAAGGCGCCGTTTACGT
AGGCGACGAAGAGCCATTGCTTCATTATGGTTTGGTAACCATGGCATAAAAGGTATGCTT
ATACCAAGGGACTTAGCCTCCTTTGCCTTATGTATTGCAGCGATCTCAGTAAGCTCCCTA
TCATAAATGTAGTCTTGGCATTGAGCACAGAAGACATTTCCATAGCTAAGGTCAACATAC
AGGAAGTGTTTCTTAGATTTGGAGTGTTCTTGAATATGACCAGCATAGCATGCAAAGTAG
ATACAGTGGAGACATGAATGCATACGAGGTCCAGGCTGGCCACAAGCAAAGCAGAGACAG
GATGTTGCCTAAGCTGATGGTCTAGTCTCTAGAGAGACCATGTCAGCGTCGCCGGGCTAA
TCACGAGTCGTGTGTATTTTATAGTATTTATATGAAAGCTACGCTAAGCTATCACGAATA
AAGACCACGCGTTTTATAAATTCCTCCCCTTATGTGTAAATTTCTAATAACAGAACACAA
TTCTGTGCTGTTTAGTTAAATTTACCATTGAAACACATAAATGGATGACAAAGAAATCAT
ATTTGTAGTTAATATCAATGTTGCTGAAGTAAAATCAATAATGTGCAACGCTCAAGATTG
AACGGCGCATCGTAATTGCGACTAAACGCAAACAGCTGTTTCGAGGTCAAAGATCACTAA
TCAGC
(965 bp)

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