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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN33713_c1_g1_i4
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Papilio_machaon]
Ontology
GO:0000287 F magnesium ion binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005737 C cytoplasm
GO:0006401 P RNA catabolic process
GO:0016787 F hydrolase activity
GO:0043137 P DNA replication, removal of RNA primer
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:4.92 TPM:2.74
ORF EntryO_BomoIG10180_5prime_partial:A_BomoIG_DN33713_c1_g1_i4
Sequence
(Nucleotide)
CTGATGATCTCGCACTTTACGTTTCTTCTAAGAATATTGATGAGGCCTCTTCTCGCCTAA
ACTCAGGCATAGGCTATCTCCAAGACTGGCTCTCAGACCATGGTCTGTCCCTATCTATTC
CTAAAAGCAAAGTGGTTGTTTTCTCTCGGTCCAGATCTTGTCCCAACGTTTCAATATCTT
ACGATCAACAAAATTTTTCGGTTGTAGACAATGTGAAATTTCTTGGTGTTGTATTAGATT
CTAGATTAACTGGTGTCCATCATATTAATCATATTGTTAAAAAATGTGAGAAAAATATTA
ACATTCTGCGTTCCTTATCTGGTGTCTGGTGGGGCTGTCACCCCTATACTCAAAAACTTA
TGTATAACGCCTTAGTACGTAGTCACTTAGACTATGGCACTTTCCTTCTTGACCCTTGTA
ACAAATCTGCTATGAGTTCCCTTGACAAACTTCAATCTAAATGTCTGAGATTAATCTGTG
GAGCTATGAAATCGTCACCTATTAATGCTCTTCAGGTAGAATGCGGCGATGCTCCCTTAT
TCCTTAGAAGACAATACTTATCTGACCGGTTCCTTTTTAAAGTCATTCAATCTCCTTATC
ATCCTCTTATCTCTAAACTCCATATCCTTTCTGATTTTATCTCTTCTAATAAATATTGGT
ACCACAAGGATTATCCCTGCCTTTTCAATAGTTTTGTCAGCTATCTTCGCCTGCCTTGTC
CTGTATCTCAGTATCAAAAATTTCCTCTTTTCGACATCTCTTTTATGGCTCTTATCTTTC
AGCCTCAAGTTCTTTTAGATCTCGGCATAGAAAAAAAATGTCATTCTGCAAATTCCCAGT
TAAATAGATACATTGCCAAGCATTGGTCCGATTGGCTCATCATTTACACTGATGCTTCTA
AGTTGTCAGACCAGGGTTGTGTTGGCTCCGCTGTCTGGATTCCCAAATACAATGTGATTC
TCAATTTTAAATGCCCCCCTCAAGCTTCAGTCTTCTCTGGTGAGTCCATAGCTATTCTGG
AAGCATTATCATTCATTGAGTCCCATAATCTAAATAAATCTGTTATTCTTACAGATTCTA
AGAGTTGTTTACAGGCTATCGTTGGTAACCAATTTAAATCAAAATCTAAATTTCCTTACA
TACTAAAAATTAAAAATTTACTTTTCAGCTGCCATTCTAAAAACATTGAAGTTGTCCTTG
CTTGGTTGCCTGGCCACAGTGGCATTTTAGGTAATGAAACTGCAGATCTTTGTGCCAAAG
ACGCCACAACAACTGGCTGTATGGATCATTACAGAGTTTATTCTAATGATTTACTCCCAA
TAGCTAAACAACGATTGCTTTCTTCTTGGAATTCTTGTTGGCAAAAGACTAGTTTTTCTA
AAGGTAAACACTATGCTGATATTCAAGGCTTTATTCCTCTCCGACCTTGGTTCTGCAACT
TCAAAGATTTACATAAACGCGTTACAAGTACGATCTGTAGATTAAGGCTAGGCCATACGT
GTACCCCCGTCCATCTGGCTAAACTTCATATCAGGGATAGTTCTATTTGCGAATGTGGTC
TTGACGAAGGCTCTCCAAATCACATGTTTTTCAGTTGTCCTCGTCTATCTTCCTCCCTCT
ATGATCTCCTTCCTCCTGATATTCCTCGCCCCATTGATCTCAAATCTCTTCTTTCCCTTG
TCAACTCTCCTTTCGTTTATATTCTTAGTTCATTCATTAACCAAAATAACATTAAGCTGT
AGTTTGTCTGTCTTTTATCGAACTAACCCCTGTATATATATTGTGTGCGTCTTATTTGTT
TTAGGT
(1806 bp)

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