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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN33706_c1_g4_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_neuroblastoma-amplified_sequence_[Bombyx_mori]
Ontology
GO:0000149 F SNARE binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0070939 C Dsl1/NZR complex
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Transcript
Level		FPKM:3.29 TPM:1.83
ORF EntryO_BomoIG10411_5prime_partial:A_BomoIG_DN33706_c1_g4_i1
Sequence
(Nucleotide)
GGGCGCGCGGCCCGCCCCGCCCCGCAGCACCAGCCGCGCCAGCCCCGACACCACGCGCTC
CGCGTCACCGTGACTCTTCTCTATCTCAGGCCAAATCGTATCCCGGGGCACGTCCGTGGA
GTCGATGATGGCCTGCACGCTGGACGAGTGGAAGTTCTCCAGGAAGCGAGCCCAGCGCGT
CAGCTCCTGTCCTACTTGCGCCCATGTTTGTTCGCTCTTGTTCGACTTGTGATCGTTCTC
CTGCTCTTGCTGGCAGTAATCGACCGCTTGTAGTATCATCAGGCTGCGAGTACCGGCAGG
AACGCGTTGAACCGCGTCATCAGAGAAGCAAGTGTCGGCCACAAACTGCAGGAGATCCTC
TTTGGAGAGCTTGTTGAAGTAGCTCGAGCATTGTCTGTATTGTTGCATCCACTTCTTGTT
GGTCGCGTTCGAAGGGACGCTAAAAAAATGTTTGGTGAGCCACTTCGTGTAGATGCTGTT
GATGGAAATGGGCGTCTTGAAGGCGGGCGGCAGTGTCCTGAGGAACTTGCCGACGATGCC
CACGTTCTCCGGCCTCATGATGTCCACCAGGTGCGCAGACAGACGCTCCGCCGCGCCCGG
CTCCAGCAGCAGCTTGTAGTCCAGCTCTGGGGAAGCAGCTTTGGCTTTCTTGAGCAGCTT
GATGTGCTCCATGACGGTCATTCCGAAGAGCACTTGTTTCTCATCGATCCCTTTCAGCAA
CGTGAAGAAGTTAATGAGCGAGCTGTGGTCGTCGCCGCGGAGCTGCGGCCAGAGCACTTC
TCGTATTCGGTTGTAGGCGGCGAGGTCAGCGGTGAGGCGGGCGGCGAGGCGGGGGGGCGC
GGCGAGGCGGCCCGCGGTCCCCGCGTGCGCGAGCCACATCTCCAGCGCGTCCAGCCCGTA
CTTGTCCGCCAGAGAACACGCCACCTCCACGTGCTTCTTCTCCTTAGACCCGGCGAGCCT
GTAGATGAGCTCCCGCCTGTAGTCGTCGTCGACGTTGAAGAGGAGCCCGTTGACCGCGAC
GCCGAGGTTGCGCAGCGCGGCCACCTCGCCCATGCCGGTCAGCTTGTCGACGCACTCGTT
GATCACCTTCAGCTGCACTTCCGAAGCGTTCTTCTGCTTCAAAGTCATCCTGGCCATTTT
GGTCGGCTTGGTCAAGTACACGTCGTCCCGCAGCGCGGCCGAGTTGCAGTGCACGAGCGT
CGCGTACAGCGCGCAGCTGACGGCCGCGTCCGTGTGCTGACTCTCCAAGAACTTCTTCGT
CACGTCGTACTCCTGAGTGGACCGCAGCAGGCAGGCCACGCTCAGCGGCGTGTCTCTGTA
CAGCAGCTCTTCCCCGCACTTCTGGACCAATTCGGCCTCTAGCTGCGCCGTGTATCCGTG
TTCGAGACAGTTTTGTATGTAGTAGGCGGAGAGCAGCGCATGCGCAGTGCCGGTCGGGCG
CTCCATCGCGAACCGGCCGTACGAGTAGTGTCCCCCATCGCCCCCCGCGGGCGCCCC
(1497 bp)

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