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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN32688_c4_g3_i3
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		ATP-dependent_RNA_helicase_DDX42_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008104 P protein localization
GO:0010501 P RNA secondary structure unwinding
GO:0015030 C Cajal body
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:5.45 TPM:3.04
ORF EntryO_BomoIG14830_complete:A_BomoIG_DN32688_c4_g3_i3
Sequence
(Nucleotide)
AAGTTTGAAGGGTGGGGCAGCCGTTGTAACTGTACTTGAGACTTTAGAACTTATATCTCA
AGGTGGGTGGCGAATTTTACGTTGTAGATGTCTATGGGCTCCAGTAACAACTTAAGACTA
GGTCGGCTGTGAGCTCGTCCACCCATCTAAGCAAAAAAAGTTTTTCTTTCTTCCTATAAG
GAAGACAGCAAGACGGTATATACTGGCAGTGATATATGGAGTGCCTCCATAACCCTGAAA
TCATGGCTACTAGAGCCAACCTTGAGCACGCAGCAATAACCATCGCCGATCTAGAGAACT
CATATCTCAAGGTGGGTGGCGGCATTTACGTTGTAGATGGTTAACACTAGGTCGGCTGTG
AGCTCGTGCACCCATATACACAATAAAAGATAAAGTTGTCTACGTGAGTAGTTTTAAGAG
ATATCTCTTGAGCTCGCCGTGAGCTCGCGCGCGGCTGTCGGTTCCTGAACCACATCGGCT
CAGCTGGCCACGTGCGACATAAGCTCCCAGACAGCACCGACCCCCGTGTTCAGACTACCC
TCACAGCGAGTTGAGGGCGGCTACTCCCAGCGGCTCTTCTTGCCGCTCTTCCGGACCCTC
TCGGGCTTGTCGTCGGGCGGCGGCGCGGGCTCGTTGACCCCGGGCTGGACCCGCGTCTGC
TCCCACGAGTGATCTGACGACGCTGTGAACTGGTTGTACTGTGAGCGGAAGGCCTGCTTG
AGGGAGGCGAGGCGGTCGGTGGCGGGCCCGTGCGGCTCGCAGGGCGCGGGGGGCGCGGGG
GGCAGCCCCGGACGCTCCTTGTACCCCAAGCCGCAGCCGCCGATGTTAAGATTCTTTCCT
TTTCCTTTCTTGAAGCGCGACTTCCTAAACCAGGCCGACTGCATCGCCAACTGCAGAAGC
TCGTCGGGCACCACCTGTTGCGCGGCCTCCAGGTTCCTCAGCAGGTGCCCCGCGAAGTCC
CGGTCGTGCTGGCGCAGCAGCAGCGAGTGCGCGTCGCCCGGCACGCCGGCGCGCCCCGTG
CGGCCCACGCGGTGCGTGTGCGTGTCGATGTCGCGCGCCACCGTGTAGTTCACCACCGTG
CGCACGTGCGGGATGTCCAGGCCGCGGGCGGCAACGTCGGTGGCAACTAGTATGTTAGTC
TCCTGCCTCTTGAAGGCCGTGATGACTCTGTTCCTGTCCGCCTGCTCCATGTCCCCGTGC
AGCAGCAGCGCGTCGTACTGCTGCACGCCCAGGTTGGCGGCCGTCTGCTCCGCCTCCAGC
TTTTTCGTAACGAATATGAGCACGCTTCCCGCCGACAGGAACTCAACTAAGTTACTGAGC
AGCCATGACCACTTCTCTTCTGGTTTGTTGAATATTCGGACGTGCTGCGTGACGAGGTGC
GCCGGCTCCCCCGCGGCGCCGTGCTGCACGCGGACGGGGTCGTGCAGCGCGTCGCGTGCC
AGTCGCTCCACGCGGCGCGGGAAGGTCGCGGAGAACAGCAGCGCCTGTCGCTCCGGCCGC
ACGTGGTTGCAGATCGAACGGACTTGTGGCTCAAATCCCATATCAAACATTCTGTCAGCC
TCGTCGAGCACTAGATAGGTCACCCTTTGTAGATTTGTAGCTTTACACTTGACCAAATCT
ATGACACGACCCGGAGTGCCTACTATTATTTCTGCACCACCACCTTCCAACGCTTTAACT
TGTTCCCATTTCGATCCACCACCGTAACAGCACACACACCTTATGTTGTACACTTTGCCG
AATTTCTTCGCTTCCATGTAAATCTGTTGAGCTAATTCTCTGGTGGGAGCAAGGATGAGT
CCTATTGGTCCATCGCCGGGCGCCAATTCCTTCTGATCCATGATGTGAACCAGTAGCGGC
CACAGAAACGCGCACGTCTTGCCTGAGCCGGTTCTGGCAATACCTATAATGTCTCGTCCG
GACAAGGCGGCGGGCACGCCGGCGGCCTGCACGGGCGTGGGCTGCGTGTACTCCGAGCGG
CGGATGGCGCGCATCAGCTGCTCGTCGAACCCGAGGTGAGCGAAGCTGCTCACGGGCCGA
GGGGGATCCGGACCCGTTATCTTCACACCTAAATTCTTTTTTAATTCCTCAACTTGTTGA
TGTGTGAGCTTTTCAATATCTTCATGAGGAGTGTAGAAGTTCTTTTCAAATGGTTCATAG
TCTATCTCAGAGTGGTCTATAGGAGGTAAGGGATCGATGAACTTTTTCTTCGCTGGAGCT
AAAGGATTGCCATCTTCATCATATTCTATTTCTACATCAGATGTGTCATCTGCATTATTC
AGAGGATTTTCTTCCATATACTTATAATAACTCTCTTCATCATCCATATCATCAATATCA
CCCCTAGTACCTCTCACACTGTCTTTTCCGCTGGCTGCATTCTCCTTACTGGTGACCAAA
TCCCGAGCTGCCTGTTGTTCCAACCCAGCCATGTAGGCATCTAGAGGATCTTCATCATCA
TCATCAGCCCTAGAACTGCTTGCTGCATTAGTAGGGCTTCCTGGTGCAGGTATATAAGCC
AACGCTGGTGTTGGAGGTTCATCATCATCATCAAAATACTCATCCTCGGTTTTGGCGCGT
TTCTTCCCAAGAGTACCCCATGTGCCAGTTACAGCATTTTGTGTAATAGCACTCATTGTA
GAATATCCTTGTTTTGAAAGACCACTGGAAGGCGGTGGGACAGCATGCATAGACGTCGTT
GGAGGCGGCACAGCATGGAGAGACACATTCGAAGGGTTTCGCTTCGGCATCGAGAAGCCG
GCAAACCCCATTCCTCTACCACCACCGCCCGGATAACTCATTGCGATATTTATTTAATCA
CAAAATTAAAATTGTTCAAGTCAAGAAAAGTGTTCAAGCCAATTTATAAGGTTATGTGTC
TCCTGTATATCATAAATATTGTTTCCTTCAATTTAGAGGTAAACATGAACCCATTGTCAA
TTATAATGCATGACAATTTCAAAGTAGGTACGTACCTACTACGTATCAAATAATAATTAA
ATATATTATTGGCAAGCAACTGTATACTATGCATAAATTGAGAATTATCAATTTTTTTTA
GTCTAGCCAAAGAGTATCAAACGCTAAGCAATATTAGTCCTAAATAGTCTAGGACATCTA
GGTACTAGTAGTTTTAGTTTTC
(3142 bp)

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