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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN32665_c2_g2_i8
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		DENN_domain-containing_protein_1A_isoform_X3_[Bombyx_mori]
Ontology
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017124 F SH3 domain binding
GO:0017137 F small GTPase binding
GO:0030054 C cell junction
GO:0030136 C clathrin-coated vesicle
GO:0030425 C dendrite
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032456 P endocytic recycling
GO:0032483 P regulation of Rab protein signal transduction
GO:0042734 C presynaptic membrane
GO:0043025 C neuronal cell body
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048488 P synaptic vesicle endocytosis
GO:1901981 F phosphatidylinositol phosphate binding
Transcript
Level		FPKM:0.13 TPM:0.07
ORF EntryO_BomoIG14734_complete:A_BomoIG_DN32665_c2_g2_i8
Sequence
(Nucleotide)
CCGAAATTTTCAGTGCCGCCCTCGTATTTTCTACATGATACCAAGTTTCAAGTCAATCGG
ATGCACGGTTCAGTAGCTATAACGGAACATCCGTAAAAACCACTGTAGATTTATATATTA
GTGTAGATGTATATATTATGATATTCAATTTTTAACATGTATAGAAAATTAAATACTCTT
AAACATAATATATACATTCAAATAAATAATACAAATCTTATATTCATAATCAACGTAATT
GAAGTAGTGGGTTTTTAATGTAACGTTTATCATTTATTCGTTACGGAATAACAGATTCAT
TTATAAACAACATAAATGATGCGATAAAGAACATAACATTTCGTGTTATCTACTGACGTT
AATTAACATTTTCATGTGGGAATATTGTAATTTTATACATCCGTATCTATTTGTGTTATT
CATCTCATTGAACAGATAATAATCTGAACGAAAATTTAATAGTTTATCTAGACTAGAGTT
TAACCCCTTTTTATTTGAAAAGTAATTTAATTTTTTTGTCTTAGAGATTCTTTTAACTTT
TTATCTTAGATTATTCTTTTAAATTATATAATGCGCGTTTTTTTATATAACTTTATTAAA
CACATACAGAAAATAGCCTTATTTGTATCACAATATGGCGTCCGAGTCTATGACTCAAAA
CACCAGTGGTTAGGGTTGTAGAGTGAGAATCGCGTGCAAGAATAATCGCGTCGTGTAGGA
TCTATCTCTGTGGTCTATAATCTGTCAAATCGTGCATTTACAGAACTAGCGGAACAATGA
CTGAATGACGCGATGACGTAGAGGTTAGAGTCCCGAATGCTAAGCTGAGGCTAGTAAGTT
ATATCTATACAAGTACGAGTCATTACTAAAACGGGAACGATACTCTCCCGGACATGCTCG
ATAAACGTTGACCGCCCCATAATTTACTACATTATTTCCGGTAGTTATTCATCATGATAA
CTTCGTCCATTATTGCAAATTATTAGCATAAATTATTTTTATTAATAGCGTTAATTAACA
TTTATGGACAACATTATAACTACATGCAACCTTTACCATTTTAATTAAAATTAACAAAAA
CAACACTCTGGTATGTTTATTTTAAATATGCGATTAGTTAAACGAAAATCAATCCCAAAG
CACTAACATAAAATCTTGTTGTTTCTCAGCCCGTATTAGGCGACAAAATGACAAATAGTG
ACGTCATTGCACCATAAACATATTGAACAGTACCTTATCTTTGACGGTTTTGAAGAAAGC
TCCACCTTCTTTCTTGACCGTCTTGGCCCAATCTCTGTACTGTTGCTTTAGTTTCTGACC
ACTACCCGTGTTCAATTTATCCGCGTACGCGTTGCATTCTACTTCGAACTCATCGTTGAA
ACCCCGTCCGGAATTGAGCAAATCCAATCTTTCGTCTATAAACTGTTGGAATATTTGGGA
TTGTAGTATTTTTCTAAGGAATGGCTGCATGTTTTTCCTCGTTTTCACAAAAGCTTCTGG
ATTGAATGTAATCAGTTGACCATTTTCAATTTTGATCGCATCGCGGTACCCGCCGATTAA
ACAGACAAGGGCGCGTAAAAATGCTCTTGAAACAGCATCTCCAAGAGCGTTTTTGTCGCT
CAAAGCCTTCTTTAAACTCGAAATCAACTCAGGGGGAAGAGTCTCCAAGTCGTTGAAAGG
AGATCTAAGCTCATTCGCGTCTACATCTAAAATCACAACGTCACCTATCTCAGACATCCT
AACATTCTCCATAACGCTTCTAGGAACTCCAATCAGAAATGGCATCGGCGCCAGCATGTA
ATCGACCAAATGCTTCGGTAATATTGGAATGAAAATATGTTGCCATGACATCGGGAACAG
AGTCGCGTTAGCCGCTTGGACACAAGCCGACAGACGCGATGGTTTCGATGCTACGATGGC
CACTCGACGTTCGTGTAACAATGCTGCCCACAGACCCGCCATGCATTTTGTATCGACCGC
ACTGAAGTATTCTGTTAGGTTGCAATTGTCTGGGATACTTGGCAGCTTGTTGCTGTCAGG
GCACTGACATGTAAATACACTGTGACCGGCATTGTATATAACCTTGAGGGTATGTCCCGG
CATTGGAGGTCGTATCCGACACGCTTCCAGGAACGAATGCAGTTGATCCCGCTCCGGACT
GTTTATTATATTCGCTATGCAATTTAATAATTTGTAAAATATATCATGCCAAGGCAGATG
TGATAAGATCACTAAAGCAGTGTTGGCTTTAGGGTCATATCGGCAAAAACAAAATGTATA
CTTGGAATCCATTGATGTCAACACAAATGAATAGTGTTGAGCAAAAGAGTTTTCTAATGA
ACACGGAAAGGTAAATTTTGGAATACTCTTAATCTCTTCTTCATTTTTATATGATTCTGG
GTACTTGAATAACACATATGGTTCCTTTAAATGATCACCAGGCGATACTTCACAGAATAA
CTCAAATAAAAATTTTACAGTTTCTCTTACTCTGGAACCCATGTCTCGACGTGGACTGGA
AATTTTGATTACATTTTAAGAAATAAACTGACAACAACTTGTTTGAAAATTCACTTATCA
TGAAACATCGCAAGCCATAGAAGACTACTTCAGGTTCGTGAATATCATTTCTTGATGATT
TTATATATATTTCCAAACTGTTACGAAAGACTCGTTTCGATCTTACTCAGTGTCTATGTT
TCGTGTTTCGCAGAGTTCGCAGTTC
(2725 bp)

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