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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN32661_c2_g1_i5
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_Topors_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005652 C nuclear lamina
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006997 P nucleus organization
GO:0007060 P male meiosis chromosome segregation
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007140 P male meiotic nuclear division
GO:0008270 F zinc ion binding
GO:0010032 P meiotic chromosome condensation
GO:0016568 P chromatin organization
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051299 P centrosome separation
GO:0061630 F ubiquitin protein ligase activity
GO:0071763 P nuclear membrane organization
Transcript
Level		FPKM:0.67 TPM:0.37
ORF EntryO_BomoIG14529_complete:A_BomoIG_DN32661_c2_g1_i5
Sequence
(Nucleotide)
TGGAACGTTTGCCGCTAGGGGCGCTGTTCCAATTACATACAAATTTGAGTTACCTAACTT
TTACGCTATCGATAACAAACTCGCACTGAGCACACAGTTCATCAGTTTTCTGTTAGGAAA
TCTTATTCTGATAAATTCAAGCTGTTATAAGATATAGGTCTCTAAGATAATTTTAAGCAC
GAGTCAAGTCTGTAACAAAGTCACCAAATGTACTAAGTATATTATTTATGCTTATCACTG
GAAGGTTCCAGCTTCTTTTTCCCATAATCCAATGCGATTAATAATATAATACAAAGAACG
CTACCATTATAGTCCTAGCACCACATTCACTTTTAATCGAAGATTCATAATATAAATATA
TAACTTTCAACACAAAAATTGTGAAGAACGAATAAATAGCCCGACAAAAGCTAAAAATGT
CGGTAGTTTCTCATTTTATCGTAGAATGTAGGCTTTTTTTAAATTAGTTGTTTTAAATAG
GACTGTGAGTACTGTGACCATGATTGGGAAGTTGCAAACCTCATTTTTATCGATATCGAT
CCGAATCCGTACATTGAAGGTAGGTGATTTTTTTCAAACGCTGCTTAATTTTATGAAGTA
TAATCTATTTCACCTGGACAGTACAAATAATCTTAAACTAAAATTACTTTGAAGTACGAA
TATACAGCGGAGTCTGTTCTAAAAGGCTTCTAAATATTTAAGTTTTTAATTTATAATATC
AACACTAAGTAGGTAGTTTATATTTGAGTAAAATATGTTATGCAGGTATTTGGACATTAT
ACTTTCTTTTAAACGCTATTTATCGTGTTATGGTCAAACAAAAATTGTTTCTTTCTTGTT
TGGACGGGTGAACAAACTCACTGTCCAACTGAAGTTAAACGTTGACCGGAGCCCAAACGC
GTCGCTATATGAATGTCACCAATCACCTTGAGATACGAGGTCTAAGTCTCAATTATAAAG
GCTTCAACAAGGAATGCATGAATGCTTCACGTGTAATTGTGAGAGAACGAGCCACATAGT
TTATTTCTAAATAATATGTAACCTTATTTATTAGCAAAAAATCACATTCAAAAGTTGCTC
AATTGCAACGCAAAAGATCACACAAACAAGCACAATTTCACTTGAAATGTTATTATTATA
TTGTCCTTTTTTTTTCTTGAGAATCTCAATTACGAACTTCGCAAACTACAGAACGCATAA
GTTTAGTCCGTTCGTTTTTTTATACAAATTTACAGACTATTCTAGAGGCTATTATTATAT
ATCGGTATCTAAAAGCCTTCGTTGCTGATTACGAAAATTACGTAGACAGCGGTTTTTAAC
TTGGAGGGGTCAACTCATCTGCAGTGTCGTATTCTGAGGCGGTGGAGGTAGGTTCTGGCG
TAGTACGATGCGTGCTTGCCATCATACCAGAGTTCGAGATGCGAGGTCGGCGACGACGAC
GGGCTGGTGATTGATACGAGTCGTCCGTATCCGAATCGGACAACTCCGTCCCACCAGCGC
GGCTCCTCTTCAATTTGAGCTTACTTACAGGCGGGATCGTCGGTCTCGTATCCGACGGCC
CAGACTTGGCCCGTGAACTCTCCTCAACAACTACATCACTATCTGAGCCGACCAGGTCGA
CCAGCTCCGGTGTTCGATCTTTCGGGGGCTTGATGTAACCAACAACCATCACTTCTGAAG
AGTCGTCGGTGTCGGAATTGGCGATGGTTTCGATAGGCATGACGGCATGTGCTGCGAGAG
CAGCTCTTGGCGGGGCTCGTCGCACCCCCGAAGGGCCGGCGGGAGGCTCAGCGGCCACAG
AATTCGGTATCATAGCGACGTCGGTGTCAATGCTCCCGTCCGATTCTGAAGTAGATATTA
CCTCATTGACCATAGTCAACGCGCGCGATTCGGTGGTGTATTGCACATTACGATCATAAC
CATTCATATCATATGGAGAGGTAGCAAAGCAGTGTAACTCATGCAAGAAATGTTCCGTTC
TCTCGCCGAAAAAGCGTCGCATCGCTTCTCGAAACTGTGATGAAGTTATGTCATAGAGGA
GTAATCTTTCCAAAATTCGCATTAATACGTAAGAAATGTGGCTGACGTTTTCATTCAGTA
AGTAGTTGAGTTCCCTGTTTAACCAGGGAACGAGGCGATATATTTCAAACATATTGTACC
TGTAGTATCCGGGACTACAATTTCGAAAGCGGCCGGTGTGATCGGGGAGAGGTTGCGCCC
GTAAGTTACGTTCGTAGATGATGCGACGAAAAGAGGCTGAAGATCTGCTGCGGGATGGCA
GGCTTAACGCGTTTGAGGACTGTGGGTAGTGTTGCAGCAAGAAGTCTTCAACGGCCAATG
AATTGTGTTGAGATGTCAGAATTGTTCTGTAACTGAACAAGATACTTGTCAGGGCTTCGA
TAACAACACTTTCGACTGTTTCATTTTGGCGCTCTTCCACTTTGTACTCTTCAAATTGAC
AACTGCTGATCACATTGTATTTTATTATTTTGAAGCTTTGTTTGCATAAAGGGCATTCTG
CTTTTACCTAGGAAAATGTAATTAAGAAAAATATTAAAATTTTATTATATCCTTTCCTGG
AGACCTAATCTACAGGTAAAAATTAACCCAGACTTGTTCCTTTGCAGCGGAGTCCAATAT
TAG
(2643 bp)

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