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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN32657_c4_g5_i1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_TRIM9_isoform_X1_[Bombyx_mori]
Ontology
GO:0000149 F SNARE binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008021 C synaptic vesicle
GO:0008270 F zinc ion binding
GO:0016079 P synaptic vesicle exocytosis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0035544 P negative regulation of SNARE complex assembly
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045202 C synapse
GO:0045955 P negative regulation of calcium ion-dependent exocytosis
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.49 TPM:0.83
ORF EntryO_BomoIG14334_3prime_partial:A_BomoIG_DN32657_c4_g5_i1
Sequence
(Nucleotide)
CTGGCAGCCGCGCGTGGTGCTCGCCGACCAGCCGCTGGCGCGCGGCCTGCACTACTGGAC
GCTGCGGCTCGACGCGTACGACGGAGACGCGGACCCCGCCTTCGGCATCGCCCGCGCCGA
CGTCGCCAGGGATAAGATGCTCGGAAGCGACGCGCTGGGCTGGGCGATGTACATCGACGG
GTCGCGGTCGTGGTTCGTGCACGGCGGCGCGCACGGCGGGCGCACTGCGGGCGGCGTGCG
GTGCGGCTCCACTGTGGGCGTGCTGCTCGACCTCACGCGCGGCACGCTGCGCTTCACCGT
CGACGACCATCCACAGGGAGACATCGCATTCACCGGACTGCGCGGCGCCTTCTACCCCGC
GGTGTCGCTGAACCGCGGCGTGGCCGTGACGCTGCAGCCGGGCCTGCCCCCGCCCGAGCG
GCTCCTCTCGCAGCTCGCCGCCGAGTGAGCCGTAGACACGTGTTCATTGAACTGCCGAGG
CCGGCGCTCTCTGACAACGCTGCGCCTACACCCTGGACCACGGGTAGAGCTGTCACTACA
TTCTATCTGCGATGAGTTTGTCACGCTATTTTACTATTAGTAAAATACCCAAAATAGTTT
TAAAGCCACTTTGAAAACATAACGATTAAAATTAATTTTCTTAACCCAGAAAAATTATGT
ATTTAAAATAAAGTATATGCTTTTTTTTTTGGATCGACAGTTGAATCACGAGAATGAAAA
ATAGAACAGACGATTTTTAGGACGTGTTACAAAATACCCTGATGTTTGAAAGGGGGGTTT
TATTTATTTAACTTATTTATTTGTATTTTGGGCACTAAACCTTAATGTGTTATGTATTTA
AATAGTGTGTTCAATGAACAAATTGTAATGATTCCCGTAAAACAGAAAAATATTTGTTTC
AAAGCGCCCTCTACTCACGAATTGAACGATATGGCATTTTAAAATTCCCATATCTGAGTA
ATGAAATTACATAAATACAAACAATCTAATCATAATATTAATCATGGATAGTAGTAGTAC
ATTTGATATATTTGTTTTCGAGAAATCGGTTGGGCGCGTCATGGAATATTCCATTCTCAA
CTTTATGTTAAATGGGAATGGGTGCATAATGTATTTAATATCACAATTAAACAGCGTCTT
TTATATAGTAACTAGTTCGGCTTAAATAATAACTAAAAACGTTCCGAGCCCCGTCCGTGA
TATAATATTTAACGTTGACATTTATTCGAAGTCATCAAACTGGTTTCTGTACAACATATA
TTACGAATATTCATAGTGAGTTCGAGAATTCATATTCTTATTTCGGCATACAATATAGTC
TTAATAATAC
(1330 bp)

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