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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN32655_c4_g3_i24
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		whirlin_[Bombyx_mori]
Ontology
GO:0001895 P retina homeostasis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007605 P sensory perception of sound
GO:0030426 C growth cone
GO:0032420 C stereocilium
GO:0042995 C cell projection
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
Transcript
Level		FPKM:4.71 TPM:2.62
ORF EntryO_BomoIG14196_3prime_partial:A_BomoIG_DN32655_c4_g3_i24
Sequence
(Nucleotide)
GCCGCTAGGAGTGCTGATCCAACTCCATACAAATTTGAGTAAACTTTTACGCGATCGAGA
AGTTAAAAAACTCGCACTAAGCACACAGATGTAATAATACACAGAGCATGAAACATCTTT
ACATAATACGAATAAATACGAATATATGGAACGTGTACAATATCTATAGCTGTATGTAAT
TTTAAAAAGCTTTAGTATATACCCACTTTAATTACATTGGGGAACGCAGTCATATTAAGT
TAAAATATAGTTCATAATAGCCTAAACAATTATTGTTTTCCAGATTAGATGTTACTTCTA
AATGATTTGTATATAAATCTCATTTGGGTGCCGAAACAGTACATTGATTCTAATATCTAA
AATAACATTTGATTATATTGCACACATTCACTTATTTACTACCTTTTTAATTATTAGAAT
GGGCTAAAATCCCTCTCCGCCAAATTTTCGTAAACTCACCGCAAAACTACCTAATGGAAT
GACAATGTAAGACGCATGATTAGTGTCAGAACTCGCTAAGCAAACTAGGAAATTCATAAT
AATATATCTATTTCCACACAATTAGCAAAGATACATTTGAATATTTAATTTAAAGTTTGA
ATACAATTAATTTAAAATCATTTAGATCCTGAATGTTTCTGCAAATCGTTTATAAGTTAA
GTTAGAAAGTAGAAAGTTTGCTTAGGAGCGCGTCACGTGCTGCAGTCTGCAAGCTCTGCT
CTACTGATGACGACGATGATGTAGCGCTAAGGCTGCTCAGTCGTGACTTCGGTTATATAC
CAGCACCATTAGCTCATGCTATGATTGATGGCGTGGTGGATATCCGCGTTCACGCAAACA
ATAGAATCGGTACAACGAGCTGGGATGAGTGGCTCGTGAACTCCAAATCAACGTTGATGG
CACACGGATGACGTGACAGCTCGGTGTGGCGCAAGCACTGATCGACCACTACTGACAAAC
TACCGATGTGAACATGGAACGTTTTCAATAGTGTGATAGATTCCTTTCCATAGCACCAAT
GCCGTTCGGTAAAACAGCGCGAATCCTTGAAAAAAAAATGGCTTTCGTGAGAGATTTCTG
AAACTACTAATTCTATTAAAGTTAGTTTTGGATCGACTATCGAACGAATTTAAACTACCT
GTTCGAGATCGTGATCGATGCGTGAAGATTTTAGGATGAACTTATCGTTATCGGTAAAAG
AGAGATTCTTTATAAAATTCAGTCGCTGACTACTTTTAAATTTCTTGATTTCTTTATTCT
AGAAAATATTTAACAAAATTCACTTCGGCCCGTCCAAAATTTGTTCCGTTAGGAGACAGG
AACCGACTTAGTTTACGAATTAGAACATTCGGGGCAGTGAACATTGCAAAACTTCCTAAA
ATTTTGACAATTCTTCTAGATCGAACCAATTTTTCGCCTCCCTTGTGCCATTAATTTTGC
ATAGCCTACTGATTTACCTGCATCGTATTTTCGCCATAGTTCTCATATCAGTCCGTTGCA
ACGTCATATTATTTGAAATATGGCATGTTGATCATCATCGTTATTCCGATCGTATGACAT
CCCGTAGAGCGGAACACGCTTTCATTTTCAACCACAAATCAAACACGACCTTTACCTTTC
TGCTTTTCAGTTTAATAAGCTTATCCGCAATACAAATTGTTCTTCTATTTAGTTTGAAGA
TAGGAATTCGGATAGAAACGTAGGGTAGGATCGTGTTGGGTTCGTATGTTGTTGAAGAGC
GCATTTAGAAGAGCATGTGGCAGCGCAGGTTGGAGTTGGCTATTCCGTGGTGTGCGCGGT
GAGGTCGACCCCCAGAATCCCGCTGCCCAGCGGGACCGGTGGGTCGCTGGCGGGGAGGGA
CAGTAGATGTTAGGCCTCCAGAAATATTAAAGCTGTCGGCTTCGGTTCCAAGTTCGACTT
TTTTGCTTCCACGACGAGGAACTCGATCTCTGGTTTATCTCTTTGCGCGAATGATTCTGC
AATAAGTCGCGCTACGTCCTGATGTTGCATGCCCTCCACGCGGTGTCCATCTACGGCCAA
AATCAGCTGGCCCACCTCTAGTCCTCCAGCCTCGTATGCGGCTCCATGTTCATGTATATT
TATAATTCGAGGTAGTGGATGTTTGGTGTTAGCGCCGCCTTCTATCGCTATGCCGAGTAT
TGGTTTAGTCTTTTTAACGGTGATGTGTAAGTTTCCGTGGTGGTCCGATACGACCCTAGC
TGCTCGACTTTCATCGGTCTGCTGATCTCCGTGCTGTAGACGCTGCATTGACTGATGCCT
TCGAATTCCTCCTCGATCATCAATCAGAGCATTGCCTTCCTCCTTCATGTCGAAGCTCCG
AGACATCTTATGTGCTAGCTCCTGATCCGCGTCATCATAGTGCTGGGTATGCAAGGCTGT
GGTGCTCCCTTCGCGCGAGTTGCAAGGAGAAGAGTGCCGGCGAGAATGTCTACCTTCTTC
TTCGTACTCCTCGTGCGGTGGCTCCAAGTCGTCGTCCTGAGGTGCGTCTGCCGCCCGCCA
CGTGCGCCCGCTCCTGTAATTATCATGCGGCGGCAAGCCCAATCCGGAATCCTCGGATGG
AGAACGGTGATCGGCCACGAGAGGAGCCTCCACCGCTACTTCCGGGTCGTGCAATTCGTG
CATCGTCGATGATGGCAGCATGTTGTGACGCTCGCTGCCACGCTTCAGATGGTAGTCGCC
AGATTCGTCGCCTTTTCTATAAACAAGCTCATCGAAGCGTGGTCTGTCTTCCGGCACCAT
AAACTCTCGGATCTCGGTAAGTAAAGTATACTTCTGCGGCGTATCTAAGAGATCTCTTAG
TACTGTAAGGAATGAGTCGGGGTTGAGTCTTCTTGCAGCATATTCTTCCATATAGTACGC
GAGTGCAGGCAGATCGCTCTGCGGTATGAGAGACCGGGCCTTTTGTTCCACAGCCACGGA
AGCTGCCCCTCTTCTTTTGCCCCAGCCGCTTATCCTGGGATTTGGATCTCGTTCACCGTA
CGCTGTACACGCGTGCGGAACTTTCCCGACATCTCGCACAAGCAGAGACATGCGCTTGTG
ATACTTGAGCTGGGCCACCGCCTCGTCGTGGGTCACATCCACGAATGATTGCCCGTTAAC
TTCTAATATCTGATCGCCGACCATGAGACCAGCTCTGTCTGCAACTGAATCCTTGTCAAC
TCCAGTAATGTAGATGCCGAGATTGTACTCCAGTCCGCCTCGGATCATTAGTCCCAGCGA
TTGCCCTGGCTCTATACATAAATCCACCCTTCTCACTGAACGGTCTTTACTCGCAGATCG
CGGGGGTCGGAGTGGAGGCGGAGAGGCAGGTCGTCCGTACCGGTCCATCCAGGAGCAGGA
GGCCCGCCCAACCAGAGCACCCGCCGTTCGCACCGTCATCGTCAACTGACGACACGACTT
AAGCATCTTGAGTGCATCTTCGTGCGAAATTCCGGAGAACGGCGTGCCATTGACCTGCAG
GATAGAGTCCCCGGGACGCAGGCCAGCTCGTTCCGCCACTGAACCCTCCTCTACCCGCGA
TATGTAAACGCCTACACCGGCTTCTTTTCCGCCTTTAACGCATATGCCAAATCCGTGCGA
GTCGGCGGGGTCCCTGCTCATGGTGACAGTGCGGGTGGCCGGCTCCGTAGGCGGCGGCGC
TCCGCCTCCCGACGAGTACGGCCTCTCCCGGTCTCGCTCGCCTCCGCGATAGATCGCATG
ATGTGTAGTGCTGCTTGGGCTACTGGCAGGAGAGTGTCTTCGAGCTGGAGCAGGCAAAGG
CGCTGGTGGATGCGAAGGCGGCAGTGCCTTGCCCAAAGCAGCAGCCCCTCCTTGACCAAA
TAACCTGAGAACTTGCTCCGGCGATATCGGACGCTTTTTGCCGTTACTCACACTCAAGTG
GTTCGTGCTGTTTCGTAAGCTTGTTGCGCCCACTGCAGTGCTAGCTATGTTAGTTGATCC
CAGGTAAGGTGTTCTAGATAATTTCCCGGAGTAGTGATGCGAATAAGAAGCATGATGGCC
GTGCGATGATGCCGGCCTTTCGATAATTGTGTACGATGTGCCCGGAGGAGAGTAGTACAC
GCCACCCCGGGCACGAGCACGTGCGTCTTCCGCCTCATAGCTCTGACGATTCTCTTGCAG
CCACTGCTGCGAACGTGAATGCCTGGCTAGATGATGTGCGGGTGGATGTTGTGGCGTGGC
AGAGCGTGTCCAGCCGTAGCCCTGTGCTGAGGAGTAGGGCGGCGGCCACCGCGAACCGAA
CTCCGCCAGCTCGGAACCCTCGCCGCCCTCCCCCGACCTCATGCCGGGGGTCACCCTTCC
CTCTTATTATTTCATTTTGAATGTATTTCTGGTGTTTCACATGTCGCCCGCCAGCGCCGC
ACAAAACCTTCGCATGTCACATATTATTGAGATTAATAACATACACGCACGTGGCACAAC
CACTGCAATAACGCTACAAGATACGTATATTTATGAATGGAGTGCAAGAGACGGCGGTCC
TTTAACGCGCGTGTTCGTATTGTTGTGGAAGGTTACCAGAATCGTAAGGTTCTCCTCGAT
GCGAGTCTTCGGTGTGGAGTGGCGCGGACGAGCGCGCGAGGTTGTCGGGCGGACGGTGAG
ATCGG
(4625 bp)

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