SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN32655_c4_g3_i11
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		whirlin_[Bombyx_mori]
Ontology
GO:0001895 P retina homeostasis
GO:0001917 C photoreceptor inner segment
GO:0002141 C stereocilia ankle link
GO:0002142 C stereocilia ankle link complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005884 C actin filament
GO:0005929 C cilium
GO:0007605 P sensory perception of sound
GO:0010628 P positive regulation of gene expression
GO:0021694 P cerebellar Purkinje cell layer formation
GO:0030426 C growth cone
GO:0032391 C photoreceptor connecting cilium
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0032426 C stereocilium tip
GO:0036064 C ciliary basal body
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045184 P establishment of protein localization
GO:0046982 F protein heterodimerization activity
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
GO:1990075 C periciliary membrane compartment
GO:1990227 P paranodal junction maintenance
GO:1990696 C USH2 complex
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoIG14162_3prime_partial:A_BomoIG_DN32655_c4_g3_i11
Sequence
(Nucleotide)
GCCGCTAGGAGTGCTGATCCAACTCCATACAAATTTGAGTAAACTTTTACGCGATCGAGA
AGTTAAAAAACTCGCACTAAGCACACAGATGTAATAATACACAGAGCATGAAACATCTTT
ACATAATACGAATAAATACGAATATATGGAACGTGTACAATATCTATAGCTGTATGTAAT
TTTAAAAAGCTTTAGTATATACCCACTTTAATTACATTGGGGAACGCAGTCATATTAAGT
TAAAATATAGTTCATAATAGCCTAAACAATTATTGTTTTCCAGATTAGATGTTACTTCTA
AATGATTTGTATATAAATCTCATTTGGGTGCCGAAACAGTACATTGATTCTAATATCTAA
AATAACATTTGATTATATTGCACACATTCACTTATTTACTACCTTTTTAATTATTAGAAT
GGGCTAAAATCCCTCTCCGCCAAATTTTCGTAAACTCACCGCAAAACTACCTAATGGAAT
GACAATGTAAGACGCATGATTAGTGTCAGAACTCGCTAAGCAAACTAGGAAATTCATAAT
AATATATCTATTTCCACACAATTAGCAAAGATACATTTGAATATTTAATTTAAAGTTTGA
ATACAATTAATTTAAAATCATTTAGATCCTGAATGTTTCTGCAAATCGTTTATAAGTTAA
GTTAGAAAGTAGAAAGTTTGCTTAGGAGCGCGTCACGTGCTGCAGTCTGCAAGCTCTGCT
CTACTGATGACGACGATGATGTAGCGCTAAGGCTGCTCAGTCGTGACTTCGGTTATATAC
CAGCACCATTAGCTCATGCTATGATTGATGGCGTGGTGGATATCCGCGTTCACGCAAACA
ATAGAATCGGTACAACGAGCTGGGATGAGTGGCTCGTGAACTCCAAATCAACGTTGATGG
CACACGGATGACGTGACAGCTCGGTGTGGCGCAAGCACTGATCGACCACTACTGACAAAC
TACCGATGTGAACATGGAACGTTTTCAATAGTGTGATAGATTCCTTTCCATAGCACCAAT
GCCGTTCGGTAAAACAGCGCGAATCCTTGAAAAAAAAATGGCTTTCGTGAGAGATTTCTG
AAACTACTAATTCTATTAAAGTTAGTTTTGGATCGACTATCGAACGAATTTAAACTACCT
GTTCGAGATCGTGATCGATGCGTGAAGATTTTAGGATGAACTTATCGTTATCGGTAAAAG
AGAGATTCTTTATAAAATTCAGTCGCTGACTACTTTTAAATTTCTTGATTTCTTTATTCT
AGAAAATATTTAACAAAATTCACTTCGGCCCGTCCAAAATTTGTTCCGTTAGGAGACAGG
AACCGACTTAGTTTACGAATTAGAACATTCGGGGCAGTGAACATTGCAAAACTTCCTAAA
ATTTTGACAATTCTTCTAGATCGAACCAATTTTTCGCCTCCCTTGTGCCATTAATTTTGC
ATAGCCTACTGATTTACCTGCATCGTATTTTCGCCATAGTTCTCATATCAGTCCGTTGCA
ACGTCATATTATTTGAAATATGGCATGTTGATCATCATCGTTATTCCGATCGTATGACAT
CCCGTAGAGCGGAACACGCTTTCATTTTCAACCACAAATCAAACACGACCTTTACCTTTC
TGCTTTTCAGTTTAATAAGCTTATCCGCAATACAAATTGTTCTTCTATTTAGTTTGAAGA
TAGGAATTCGGATAGAAACGTAGGGTAGGATCGTGTTGGGTTCGTATGTTGTTGAAGAGC
GCATTTAGAAGAGCATGTGGCAGCGCAGGTTGGAGTTGGCTATTCCGTGGTGTGCGCGGT
GAGGTCGACCCCCAGAATCCCGCTGCCCAGCGGGACCGGTGGGTCGCTGGCGGGGAGGGA
CAGTAGATGTTAGGCCTCCAGAAATATTAAAGCTGTCGGCTTCGGTTCCAAGTTCGACTT
TTTTGCTTCCACGACGAGGAACTCGATCTCCTATAAATAACCAAAATCATCCTTAACATT
TTTGACATATGATATGGTCAAATATTGAATTGCGTTTTTTAAATGATGATAATACTAATA
TAGCACAAATCTGTACGAGTATATTCTACATAATTCCTGTTATTAAATATTGTGTAATGG
TTAAACAATGGATTTTTCTAATAAAAGGTAAATGAAGGCTGTCAGTGCCATAAAATGTGG
ACTTATGAATATTGCAAGAACCTGGTACGGCAAATTGTTATTGCTTGAAATGTTACTTGG
CATTCTCAGACAGACAATTAGATCGGGGACCGAATTTTAATTCGGGGATCGAATAATAAT
TTATAAGAAACGTTGTCAGCTCGTAAACGCAACCTGAAATAATATTAAAAAATAACAGGT
CTTAGAAAATTGATAAAATACTGTCTGAATTCATAGAAGACAGTTAATTAGTAAAGTGCG
ACTCGGCCCTGCGCTGTTTTTTATCTTTCTAGCATCGACCATACTAAAAAAACTCCAAGT
CTCTTTATTTATTTTTTGTCCCAATGAACACATTATTAGCGTGTCTGTCATTGCACCCGA
ACCTCGGTCAAAGCACTGCTGATAGTAAAGCTTCTTCTTAAGCACCGTGTGTGAAGGAGA
TAGAAATTTTGGCACAGCAAGATCATTACAAATTCTAATGACGTATTAACGTTGAGGAGG
CGAAAATCTCTGAAAACTTACTGTGATTTAAATAAGTCGATTAAAACTGGTAAACCTCCT
CCCGTAACGCGTAATGTCCAGATAAAATGGTAATTATGAAGTTTAACTTCTCGCAGTAGT
CTTCGGTGGTAGAAGGTGAAGTAGTGAACGAGAGTGTACTCACTGGTTTATCTCTTTGCG
CGAATGATTCTGCAATAAGTCGCGCTACGTCCTGATGTTGCATGCCCTCCACGCGGTGTC
CATCTACGGCCAAAATCAGCTGGCCCACCTCTAGTCCTCCAGCCTCGTATGCGGCTCCAT
GTTCATGTATATTTATAATTCGAGGTAGTGGATGTTTGGTGTTAGCGCCGCCTTCTATCG
CTATGCCGAGTATTGGTTTAGTCTTTTTAACGGTGATGTGTAAGTTTCCGTGGTGGTCCG
ATACGACCCTAGCTGCTCGACTTTCATCGGTCTGCTGATCTCCGTGCTGTAGACGCTGCA
TTGACTGATGCCTTCGAATTCCTCCTCGATCATCAATCAGAGCATTGCCTTCCTCCTTCA
TGTCGAAGCTCCGAGACATCTTATGTGCTAGCTCTAGAGGTCGTCCCCAGTACCATGACT
TTACTTTCTGCGTCCAGCCACCGAGTGATGAGCGCAGCCCCTCGAGATAGCCGCACTGAT
CCGCGTCATCATAGTGCTGGGTATGCAAGGCTGTGGTGCTCCCTTCGCGCGAGTTGCAAG
GAGAAGAGTGCCGGCGAGAATGTCTACCTTCTTCTTCGTACTCCTCGTGCGGTGGCTCCA
AGTCGTCGTCCTGAGGTGCGTCTGCCGCCCGCCACGTGCGCCCGCTCCTGTAATTATCAT
GCGGCGGCAAGCCCAATCCGGAATCCTCGGATGGAGAACGGTGATCGGCCACGAGAGGAG
CCTCCACCGCTACTTCCGGGTCGTGCAATTCGTGCATCGTCGATGATGGCAGCATGTTGT
GACGCTCGCTGCCACGCTTCAGATGGTAGTCGCCAGATTCGTCGCCTTTTCTATAAACAA
GCTCATCGAAGCGTGGTCTGTCTTCCGGCACCATAAACTCTCGGATCTCGGTAAGTAAAG
TATACTTCTGCGGCGTATCTAAGAGATCTCTTAGTACTGTAAGGAATGAGTCGGGGTTGA
GTCTTCTTGCAGCATATTCTTCCATATAGTACGCGAGTGCAGGCAGATCGCTCTGCGGTA
TGAGAGACCGGGCCTTTTGTTCCACAGCCACGGAAGCTGCCCCTCTTCTTTTGCCCCAGC
CGCTTATCCTGGGATTTGGATCTCGTTCACCGTACGCTGTACACGCGTGCGGAACTTTCC
CGACATCTCGCACAAGCAGAGACATGCGCTTGTGATACTTGAGCTGGGCCACCGCCTCGT
CGTGGGTCACATCCACGAATGATTGCCCGTTAACTTCTAATATCTGATCGCCGACCATGA
GACCAGCTCTGTCTGCAACTGAATCCTTGTCAACTCCAGTAATGTAGATGCCGAGATTGT
ACTCCAGTCCGCCTCGGATCATTAGTCCCAGCGATTGCCCTGGCTCTATACATAAATCCA
CCCTTCTCACTGAACGGTCTTTACTCGCAGATCGCGGGGGTCGGAGTGGAGGCGGAGAGG
CAGGTCGTCCGTACCGGTCCATCCAGGAGCAGGAGGCCCGCCCAACCAGAGCACCCGCCG
TTCGCACCGTCATCGTCAACTGACGACACGACTTAAGCATCTTGAGTGCATCTTCGTGCG
AAATTCCGGAGAACGGCGTGCCATTGACCTGCAGGATAGAGTCCCCGGGACGCAGGCCAG
CTCGTTCCGCCACTGAACCCTCCTCTACCCGCGATATGTAAACGCCTACACCGGCTTCTT
TTCCGCCTTTAACGCATATGCCAAATCCGTGCGAGTCGGCGGGGTCCCTGCTCATGGTGA
CAGTGCGGGTGGCCGGCTCCGTAGGCGGCGGCGCTCCGCCTCCCGACGAGTACGGCCTCT
CCCGGTCTCGCTCGCCTCCGCGATAGATCGCATGATGTGTAGTGCTGCTTGGGCTACTGG
CAGGAGAGTGTCTTCGAGCTGGAGCAGGCAAAGGCGCTGGTGGATGCGAAGGCGGCAGTG
CCTTGCCCAAAGCAGCAGCCCCTCCTTGACCAAATAACCTGAGAACTTGCTCCGGCGATA
TCGGACGCTTTTTGCCGTTACTCACACTCAAGTGGTTCGTGCTGTTTCGTAAGCTTGTTG
CGCCCACTGCAGTGCTAGCTATGTTAGTTGATCCCAGGTAAGGTGTTCTAGATAATTTCC
CGGAGTAGTGATGCGAATAAGAAGCATGATGGCCGTGCGATGATGCCGGCCTTTCGATAA
TTGTGTACGATGTGCCCGGAGGAGAGTAGTACACGCCACCCCGGGCACGAGCACGTGCGT
CTTCCGCCTCATAGCTCTGACGATTCTCTTGCAGCCACTGCTGCGAACGTGAATGCCTGG
CTAGATGATGTGCGGGTGGATGTTGTGGCGTGGCAGAGCGTGTCCAGCCGTAGCCCTGTG
CTGAGGAGTAGGGCGGCGGCCACCGCGAACCGAACTCCGCCAGCTCGGAACCCTCGCCGC
CCTCCCCCGACCTCATGCCGGGGGTCACCCTTCCCTCTTATTATTTCATTTTGAATGTAT
TTCTGGTGTTTCACATGTCGCCCGCCAGCGCCGCACAAAACCTTCGCATGTCACATATTA
TTGAGATTAATAACATACACGCACGTGGCACAACCACTGCAATAACGCTACAAGATACGT
ATATTTATGAATGGAGTGCAAGAGACGGCGGTCCTTTAACGCGCGTGTTCGTATTGTTGT
GGAAGGTTACCAGAATCGTAAGGTTCTCCTCGATGCGAGTCTTCGGTGTGGAGTGGCGCG
GACGAGCGCGCGAGGTTGTCGGGCGGACGGTGAGATCGG
(5559 bp)

- SilkBase 1999-2023 -