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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN32639_c2_g12_i4
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		methyl-CpG-binding_domain_protein_2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000785 C chromatin
GO:0000790 C chromatin
GO:0000792 C heterochromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006346 P DNA methylation-dependent heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008327 F methyl-CpG binding
GO:0019904 F protein domain specific binding
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0031492 F nucleosomal DNA binding
GO:0035197 F siRNA binding
GO:0042127 P regulation of cell population proliferation
GO:0042711 P maternal behavior
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0043623 P protein-containing complex assembly
GO:0070742 F C2H2 zinc finger domain binding
Transcript
Level		FPKM:1.75 TPM:0.98
ORF EntryO_BomoIG15704_complete:A_BomoIG_DN32639_c2_g12_i4
Sequence
(Nucleotide)
CACGAGCGCAGTTTGACTACAGGTTCCCATTAGTGTCCTAACTTATCTTGTGTTGTGAGT
TGTTAGTGCAATTCTGTGCTTTGTGTTTTTCATCTGTAATGCTGTTATGTTCAATAGACG
CTTAAATTATAATGTTTACCTTAATACTGGGTCAATTGCCTAGTATTAAGTGGATTATCC
ATTACCGCAAGTTTGGGGGTGTACGTAATGATGCTTCATTAGTGCCACCAATTCGTCAAA
CAGCATCAATATTCAAACAGCCTGTGACGGTCTACAAAACTCAAGACAGTAAAGTTAAAA
CAGATCTCAAGCATGGGACACAGGAAAAGCCTAAACAATTATTTTGGGAAAAAAGACTAG
AGGGATTGACAGCTTGTGATGCAAATGGTGTAATTGGAACTACAAGTCTACCAAAATACA
TCAAATCCTTGGGACCATACACTTCTGATGCCACCACTATCCAGTCATTGGCTACAGCAC
TTCATGTATCTTCACAACCTATAACTGGACAAATAGGATCGAAACAAGCCATAAAAGACA
ATCCAGGTGTTTTTTTAAACCCAGAACAACCCCTGATTGCTGCAGTGACAATCACTAAGG
AAGATGTGCGACGCCAAGAGGAGCGCGTGAAGCGAGCTCGCCAGCGATTGCGACAAGCTC
TATCGGTGGCCTAGGGCTGCGACGGCGGCGGTGAACCTAGTGTGGAAACCGCTGCCGACC
TTTCTATGTCCGCTATGCTTCCCGACTCTACACAGGACTCCCCCAAGTCCACAGAGTCTA
ATAGAAATGACTAAAATGGTTTTTACTTTTTGTAAAACCATATTGCAGGATATCGAATTC
CACTAAATAAGATGTAATTCCCGATTGAATTAATTGAACTCAATAGTAATGTTACAAGAC
ACAATTTGATGTTGTCTGAACAGATGATAAGAAAAACTTCTTGTACCTCAATAAGTAACG
GGAAGTAGTAATTATTGCCTCGTTATTTGGTTAGATACGCTGGATACTGCACCAGGTCCA
CTGGAGTCTGTAATCTCTCTAGATATGGTATTTGGTACCTAAGAGTTCTTGTTTTTTCTG
GTATGTGCCTTGGGGCCTCAATGCGAGAAAATAGTCATTTAGGTCCACTGGGAATTTCCA
CAGTTCCTTATTTAGCTATAGTCATGTCATTTTAATCATTTTTAAAATGCCAACATTGGT
CTCATAACAGAATTGCTATGACATAATATGAAAACAGTTTTATATCATAATTATCTTACT
ATCCTATTTAATAAGTTTAAGATTAGATATACAAATCTACTTATCTTTAGACATGGCCTA
ATTAATTTAAAGAAAATCAATCAGTCTAGCGTCGCATGGTCACATCAACAGCAACCACAG
TGACAGGCTATTGAGTAAAAGTCGTACACAGTTTTTACACATTAATTTATTAAAAGGCAA
TTGTTGCAATTATTGTGTATTCTATCACTATCTGTAATTGCAAGACAGTTCACAACCATA
AATTTTTAAAACAGCTTTTAGGTAAAACTTCTAAATTGCATGAAAATAAGCATAGTCGTA
TATGCAAAGTGTACACATTTATACGCGGTGGTGTAAAGATACCGATCCCGCAACGGAAAC
GGAAATAAACTTGAAAACATTGATTTTTTAAAAAAAGATTTGTATTACGATGTTTACATT
TTGTGAATAACCCGTGATTGCATATTCCGCGTGTTTGCCGATTATAGTTGTGTTTATTGA
CAAAAAATATTTCACAAATTGAGGAAAATTCAAATTTTTTTTGTTATTTGTAGGCAGCAG
AAAGAAAAGTAATATAATTTTTATCTAACTTAAAAGATTTTCGGGATCGGTTCCAATACA
CCCTGTATAGGTGTGATATAAGGCGTAATTTAAATTCATTAAAGGTAGATTTAAATTTGT
ACAAAACCTAGTGATTGCAATATTTAAAATGGACGGCGCGAAATGACGGACAAGCAGAAT
GTCTAAGATATTAAACTTTAGTAGTAAATATAGTATTTAAGTTTTGATAACTATATATTT
AGTTTTTTATGTGTTAATGTCTTATTTCTATCAATAAAAATAGTGAAAATAAATTAAATT
ATAATGTTATTTTTTTTAAGTATTTCTCTCACTATGACTAGAACAAATGGCTAAATTGTC
AAGCTTATGTAATAGGTCTTATGATTATAATTTAAATGGGCATAGCATAGCTTATTATTG
GCAGTCTTACTTGGATAATAATAATTTTTAAATACTTTAATTACTCTACCATATCGAGGG
GTGAAAGGCTATTTGGTTTGAGTGACATTTTTGCAACATAACAGGAGAGCCA
(2332 bp)

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