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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN32624_c4_g1_i4
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		irregular_chiasm_C-roughest_protein_[Bombyx_mori]
Ontology
GO:0001745 P compound eye morphogenesis
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007409 P axonogenesis
GO:0007520 P myoblast fusion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016202 P regulation of striated muscle tissue development
GO:0030165 F PDZ domain binding
GO:0042802 F identical protein binding
GO:0045177 C apical part of cell
GO:0046331 P lateral inhibition
GO:0046666 P retinal cell programmed cell death
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048749 P compound eye development
Transcript
Level		FPKM:0.27 TPM:0.15
ORF EntryO_BomoIG17000_complete:A_BomoIG_DN32624_c4_g1_i4
Sequence
(Nucleotide)
ATGAAGTTCATATTTACAATTCTTGATATACGTTTTTAAATTCAGATCAATGTAACAACA
AATAAAAGGCCTTGGTAATTATTAATTAATTATTGTACACTCCGAGTGAAGAAAAATAAA
TTTAATTTATATTGACTTTAGGTCGAATGGTTAGCGATCCTGAGCACGTGATTCGGGTTT
GATTCTGTGCGTCTTTTTCGGGTACATTTTATCAATGCTTACTTTTAAAATCTGATTTCT
GCATGTTTTGCGTGTAAGAATTGTAACCAAACATCACAAAAACATGAAACGGATATGATA
GAGAACTAGCTCAACAGAAATCGCAACGAGCAGAATCAATGCAACGACGCTTACCATCGG
CGTTCATCACATCACAATTATTGAGTACAACGAACTCGGAAAATATTGTTAAGTAAAACT
AGAGAGCCCGAAGTTGAATATTCAAATAAACACTTCCCAAGAACACGCCCAACATACAAA
CGTTCGAAAGCCGTTTGATTATTTTCGAACGACTTCTGTCCAATAATAAACTTAGTTATT
TATTAATCGACATTAATAAATTTACAAACAATTCAATTGAATTAGAATTGACATATTTAA
TTTTACATTTATACAATTTTACAATCAAGCTATTCGTAGAGTCTTTGTTAATGTATATTT
TGATAGTCTTATACGTGCGTTGCCAAGGGTGATTGCAAGCCATTACCTTTCTTAGTAACA
GCGGCCGTTGTTATACTCCTGTTCGATGGTGCGAGTATGTAATGTGCGCTAGGAGACTGT
GGGGTCGCGGACGAAGTTGCCACGCCGGTCAGCGGCTGGGTGCTGTCAGTGGATATAGTT
GACGTTGTTATAGGACTAGTAGCGCATTGTGGTGAGGCTACACTTGTTGGCGATGTTATA
GAGTGAGAGGAGTTACCTGAAGGTAATATTACAGAATTTCTGACAGACGAATAAGGTGGT
GGCGCTGGAGTGGACGCCGGTTTGGCAGTGTTAACAGTATTGAAACCCAGTCCACCTCCA
GAACGTAAATGTGGATTCCCATATGTTGCTGCGTATCTTATATCAACACCATGTATGCCA
CCATTAGGCACGCGGCTTACCTCTGCTGTAGGAAGGCCCAGGTTATTCAATGCGCTGCTG
CTGTCTTGCCGTTTTGTTGAACGCTGCAACGAGTTATTTTGGGATCCGTTCCCTACGTTG
TATTGAACCGTCGATGGCGTATCGACACTTCTAGGTAAACTTCCGTTTATAGACCTGTTA
GGGGTGAGTTTATCGCTGGCCAAAGTCGGCGACTGCACCCTCAACGAACCAGGCGTGTAA
TCATGTCCATAATGAACATACGTCTGATAGCCGTTGTTAAAGCCATTGACCTTGTAACAA
TCAGCGTAAGCAGGATCTGTGTAATCGTTACTATATCTGTACGGCTGATAGTTATTCTGG
TTCATAGATGCTAAAGGAACAGAACCGGCCAATGGAATGCCGCTGCCTAATTTGGCATTA
GAACACAAGGTACTATCTGAGCCGGTGTTGGAATAATCAATTTCACAGCTACCGTTGGCC
TGTCTTAGTTCAAGCTTCAGGTCGCTAATGTTTGAGTTCCTGTCGTTATCCTTGAAAAGC
TCTTGGGCCGTGACAGTCACATCTGGCTTCTCGGCGACTTGACTCTGCTTTCCCCTTTTT
TGCTTTCTTTGGCAAATTATTATCAGCATAGTTAGGCAAACCACGGCAATCGTGCAAGTG
GTTACGCTGAAAATTATCACCAGCAGTGGAAGGGCCTCTTTAGCAGTCACGGTAATCTCC
AAATAGTCATTGCCATAGTCATTAGACACGTTACATTTGTACACGCCGAAGTGCTTGTAT
TGGCTCTCTCGAATTATTAGCGTAGAGTTAACTATGCCTCCTGATTGTAGATCTTCGAGG
AATGCGTAGTCCTGATCATGCAACGAATCTATTTCTCTTCCGTTAAAAGTCCAGATAATA
CTGTCTATCCTCGGCACGGCGAAGGCTGCACACTCAATGTTCACTGTGTCCCCCTGGGTA
CCGAATTGTGTCTGATTCGATATTATCTTCGGAGGACCTTTAATGAACACCGACGCCTCT
GCTTCTATTTCAGGGAATCCGTCCACGCTGGCTTTACAAAGATACCTCCCTGATGTGTGG
GTATCCACTGTGAGAGTTAAATTAGGGGTGCGTCCCACGCGAATAGTCTGGTCTTCTTCA
TGATGGAGCCATCGTATCTCTGGATTCGGGTAGCTATCCACATCGCAACTCAAGGTTACG
CTAGTGCCAACTTCGGCTTCGACGTCCTTGGGGAGATGGCGAAAGGATGGCGCATAAGTA
ATCTCCAAGGTCTCCTCTTCCTCAGTCTTTCCGACGTCGTTGTAAACAACGCATTTCACT
ATTGCGTCGTGGTACTTTCTTGATATGTTGTAGATTTTCAATTCAGTAGTGTTTCCATTT
ATAGATTCCTCATTTATATACCATTTGTAAGTTAGATTCGTTGGATTGGCGTCTGCTTTG
CAGCCTATTGTTACATCATCCCCTTCGGGAATTCTCCCATTGACTCTTGATTTTATGTAA
ATCTTCACTTTAGGAGCGTATTTCACCTCGATTTGTATACTGGCCGCCCTGTACGCCCGG
TCCGCTGTGTTCTGAGCTTGACAAATGAAAGTTTGGTTGTGATGTTCCTTCTTGGGCGTC
ATATTTATAATTGACCTCGCAGTAAACCTTTGTCCGTCAGACAGGGGCTCCACGGTGTAA
GTGACACCTTGAGTCAAAACTCCGGCGTTGCTATCCACCCACGTTATCTCAGCGGGCGGC
TTTCCGCCGACCGACACGCATTCCAATTTGATATTTCTGTCTTCGGTGGTTGAGTAGAAA
TTCCCTTGCAGTATTTTCGGTGGTTCCGGCGGAACTAGCACGGTGAGACGGGCGTATCGT
GACCTAATTGCTGGTTCACCTTTAACTCCTGAGCTGACTTGGCACTGGTATTTGGCGTCG
TCATCTAAATTTACGTCTCTGATGTCCAAAGAGTAGTCACCTTCCTCGTCGCTACCGATC
ATCTTATACCGGTCATAGCCGCTCAACTCTCTGTGGAGTCCAAGGCCGAAATCATCCTTT
GTCCACTGGAGTTGACCCACCTTGTTTTCAACTCTGCATGGCAGTGTCACCCTCGAGCCA
ATAACGGCGGTCTGATCCTGTGGCTCCATGGCGAACTTCTGCTCCGCGAAGCCGCAACAA
ACACTGAACGAACTGATAAATATCGCACTGAACACGTAAAAACGCACATACTTGGTCCGC
AACAACAGAAACAACGGTTTCACATCCCTACTAGTTGTCCTCGGTCTGTAGTTCGACATG
ATGCCTACACTTTCACTGGCATAAGGATATCCGGTGCTATTTGTGGATATTCACATTTCT
TCGGCTTCCCCAGATCGAGTCGGTTCTATTATAAGAAGGAGACCGTTAGGGCTAAGCGCC
ATATTATTTTCGGCCGCTTTTGAGATGAATGATTTATGGGTGGGCTGTTTGAAGTGATGA
TCTGTGGCGACGATTATCTTTCCTCGTCCAAATCTCACGGTAAACACAGAATGTAATCCG
TCGTCAACATTAAAATTTCAACGTTAACATAAACACAATGTAAACACACATAAACAAAAA
AAAAATATAGAAAAGTTAACAACACCACAATGGTTTATTTATTAAATTCGAATTTCGAAT
TCTGTTCGAAAACGTTCGAAATTTATTTTGTTTTTAACGCACACACTGACACGTCGTTCG
ATATTCGAAATGCCGCGTACTGGCTGGAGCTACCCGACGGTTGTTGCTCTGCCGGTGAAC
T
(3841 bp)

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