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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN32606_c9_g1_i1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101735409_isoform_X3_[Bombyx_mori]
Ontology
GO:0000302 P response to reactive oxygen species
GO:0003756 F protein disulfide isomerase activity
GO:0004656 F procollagen-proline 4-dioxygenase activity
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006457 P protein folding
GO:0009897 C external side of plasma membrane
GO:0016020 C membrane
GO:0016222 C procollagen-proline 4-dioxygenase complex
GO:0016853 F isomerase activity
GO:0018401 P peptidyl-proline hydroxylation to 4-hydroxy-L-proline
GO:0019899 F enzyme binding
GO:0034663 C endoplasmic reticulum chaperone complex
GO:0034976 P response to endoplasmic reticulum stress
GO:0042158 P lipoprotein biosynthetic process
GO:0042470 C melanosome
GO:0044822 F RNA binding
GO:0045454 P cell redox homeostasis
GO:0046598 P positive regulation of viral entry into host cell
GO:0046982 F protein heterodimerization activity
GO:0070062 C extracellular exosome
GO:0071456 P cellular response to hypoxia
GO:1902175 P regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
Transcript
Level		FPKM:178.83 TPM:99.58
ORF EntryO_BomoIG16178_complete:A_BomoIG_DN32606_c9_g1_i1
Sequence
(Nucleotide)
CGCGCCCTCAGCATGGCTCGGTGGCCGGTCATTCTGGCGGCAGTGTTGCTGCTCGCCGCC
GCCGCCGCGAGGAAGTCGCCCTCCGCGCCCGCGCCCCCGCCCCCGCGACACGAGCCCCGC
ATCGAGGAGGTCACAGCCAAGCAGCTCGACCGGGTACTGGCCGAAAAGGACTTCGTCGCG
GTCTACTGGTACGCAAGGAGCTGTGTGACGTGCGACAAGGTGCTGGATGAGTTGGAGAAG
ATCGACGACGACACGGACACGTTCGGCGTGGACTTCGTCAAGATCAACGACAAGCGGCTC
GCGAAGCAGTATGGCATCACGAAATTCCCCGCCCTCACGTACTTCCGTGAGAAGGAACCG
ATCATTTACGAAGGAGATCTCATGGACGAAGAAAGTGTCCTGGATTTCCTGACGAGCTTA
GAAGCAATGGACCTTCCTGACCGGATAGAAGAGGTTAACCAAAAGATTCTGTCGAAAATT
ATCGAGGAGACAGACTATGTAGCAGTGCTTTTCTGTCCGGATCACAAAAGTTGCGGTCCC
TCAAACAACAAGCCGGAGTGTAAGAAATGTGCGAAGGCTCTACAAGAGTTGGAGAACATT
GACGACGAGGCCGACCAGCTCGGGATTGGTTTCGTGAAGATCCACGACGAGGAATTGGCC
GAGGAGTACAGTCTTGGAGAACTGCCAAGACTGGTCTACTATAGGCATCAAATACCTATT
ATCTATGAAGGTGAATTGAGCAAGGAAGAGGACGTGCTGGAGTGGCTGATTGCCAACAAG
TCTACCGGCGATGAGGAGGACGTCATCGAAGACGTAACAGCCAAGACCTTGAATACTCTG
ATTATCAACGTCGATCATCTTGTTGTACTCTTTTACGACCACGGCGACGAAGAATCAATG
ACTGTTCTGAATGAGTTGGAGAAGATAGACGATGACTGCGACCGTCACGGGATCCAGTTC
GTCAAGATCGACGACCAGAAGGCGGCGCGAGCTTTCGGCATTGATGACCTACCCTCCATA
GTCTACTTCGAGAAGCAAATACCAAATGTTTATGACGGAGACCTTGAAAACGAAGAAGAA
ATCTTAGAGTGGCTTGTAGACCAACTAGAGAAGGATGAAATTGAAGATGTCACCGATGAA
ATGCTGGACCGGCTCATCAAGGACGGGAAAACTGTCGCCGTGTTGTTTTATGACAACAAC
GATCGTAGGTCACAGAAAGTGCTCAACGAATTGGAAAATATCGATGACGAATGCGATCAG
CTCGGCATTGCGTTTGTGAAAATTGACAACGACGAGGAAGCCAAAGAATACGGCATCGAA
AAGATACCGACGCTTTTGTACTTTGAAAAGGGAATACCCACGTACTACGAAGGAAACCTT
GAAGAAGAGGAAAAAGTATTAGAATGGTTGCAACATCAAGCCGAGAGTGACGAAATCGAA
GACATCACCGACGAGATGCTGGACCTCATCATTGAGAAGATGCCGTACGTGGCCGTCTTG
TTCTACGACAAGGACCAAAAGAAAAGCCAAAAGGTCCTGGTTGAGTTGGAGAACATTGAT
GATGAATGCGATCAAAATGACATCGCCTTCGTGAAAATAGATGACGACAAAGAGGCCAAA
GAGTATGGCATTGAAACCATCCCTACCATGGTGTTCTTTGAAAAGGGTATCCCACATATT
TATGAAGGTGATTTGATGAAGGAAGAAGAGCTTCTTGGATGGTTGCTGCATCAGAAACGG
CACAGTGAAATCCCTGAAGTCACGGACGAAATGATGGACAAACTCATCGAAACAACTCCT
TATTTGGCGGTTATTTTCTATGACAAAGACGACAAGCAAGACATCAGGATCCTCAATGAA
CTTGAGAACATCGACGATGAATTAGAGAAAGAAGGCATCGTTATTGTGCGTATGGACAAC
GATGCAGAAGCCAAAGAATACGGCATAGATCATCTGCCCACGCTGGTCTACTTCGAGGAG
CATATCCCGGCGATATACGAAGGCGACCTCATGAACGAAGACGAAGTGCTGGAATGGCTG
ATCGAACAGAAGAACAGCGCGACCATCGAGGAAGTCACCGATGAGATATTAGTCGATCTT
ATTGAAGAGCACGAATATGTTGTCGTGTATTTCAGCGGTAACTGCGAGGAAGGCGAGGAA
TGCGACAACATCTTGGATGAACTGGAGAATATCGACGACGAGCTTGATGAGACCGGCATT
ATCTTCGTGACCACCGAGGACACCAGCTTAGCCAAGAAGTACGGCATCAAGACGTTCCCG
ACCCTCGTGTTCTTCAGGAACAAGGATCCGTTAGTCTACAAAGGTGACATCGAAGACGAA
GATGAAGTATTGGCGTGGTTAACTGACGAGAACACATTGGAAATTCCTGGCAAAATTGAA
GAGGTCAATTCTAAAATGCTTGAAAAGATTCTAGAAGAGAACGATCACGTCGTTGTATTC
TTCTACAAAGAAGGTGACAAGAAGTCTCAAAAGATTCTAAGCGAATTGGAAAACATTGAC
GACGAGTGTGAAGAAAAAGACATCGACTTTGTCAAGACATCAGACAACGGCATCGACAAG
GAATACGACCTCCCAGAATTACCAGCCTTGGCTTTCTACAGGCACAAGTTCAGGACCATC
TACGAAGGAGACTTGATGCACGAAGAAGCTATCTTAAAGTGGGTTTTAGATCTGCACGAT
TCACAACCGGATATCATTGAAAACGTCGACAGGAAGACTCTTAAGAACCTAATCAATGAT
GTTGAACATTTGGCCGTTTTCTTCTACAGTGAAGATTGTGACACGTGCGACGACATCCTG
GTGGAGCTGGAGACTATTGATGACGACACTGACAAGCACGGCATCCAATTCGTAAAGTCA
AAGGATTCTAAGCTAGCTACCGATATAGGAATATTCAGTTTCCCGGCTTTGGTTTATTAC
GAAACTGGTGTTCCGATTATGTACGACGGTAAGGATTTCACCGACAGGGAGTCGAACGGT
TCAGTTTCCTGGTCCACCTCTGACCCTGAGATGAACCTTTCGGCGGAGACTGGCCACGCG
TCGAATGTTTCAAATTTTACTCAAATTATCAGCTCAGATTTGGCAAACCGTTAACAGTGT
ATTAATATTGTTAATGGTTTGATCAACAATTAAGTTTGGTTTGCTCACCTGCCAAGCTAA
ACTGACCGATATGTGTTTACATGTTTTAATAACACCATGTTCTATTTATAGGTGACTTAA
AGAACGAAAATAAGGTTCTCCAGTGGCTTGTAGATCAAAAAAGTAAGAACCCACATCCGC
ATAGTAAAATAATTATTTAATTTAGCAATAAAATACGTGCATGACATCATTTGACTCTAT
TGACTT
(3366 bp)

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