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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31582_c2_g5_i3
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		vacuolar_protein_sorting-associated_protein_41_homolog_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0008017 F microtubule binding
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030123 C AP-3 adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030897 C HOPS complex
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0033263 C CORVET complex
GO:0034058 P endosomal vesicle fusion
GO:0035542 P regulation of SNARE complex assembly
GO:0042144 P vacuole fusion, non-autophagic
GO:0042802 F identical protein binding
GO:0043621 F protein self-association
GO:0045055 P regulated exocytosis
GO:0046872 F metal ion binding
GO:0048193 P Golgi vesicle transport
GO:0051020 F GTPase binding
GO:0071439 C clathrin complex
GO:1902774 P late endosome to lysosome transport
Transcript
Level		FPKM:0.41 TPM:0.23
ORF EntryO_BomoIG100484_complete:A_BomoIG_DN31582_c2_g5_i3
Sequence
(Nucleotide)
CAGAAAGACAATAATCAAATTCAGAAAAGTGCAGAACAGAACAAACGAAAGAAGAATTAC
GTTTTTATTATTAAAATGTGATTTTTTTAAACGGTTGAAATTCAAAACAATGGCTGTTAA
TATTGAGAGCTGCGAAAGCTTGCCTCCCGATGAGGAGCCGAAGCTAAAATACGATAGAAT
GGAAAATGATTTATTGAATATTTTACTGAAAGACGCTGTCAGTTGTATTTGTGTTCACAC
CAAATTCATCTGTATCGGAACACGTTGGGGTGTGATACACCTGCTAGATCACGAAGGTAA
CATAGTTGCTATATCCCAGGACGGGAAGACTGAATTCCAGGCTCATACTATCGCTGTCAA
CCAAATATCTGTAGACCAAAATGGGGATTACATAGCGAGTTGTTCAGACGATGGTAAAGT
TGTCGTATATGGATTGTACAGTAATGATAACACGCACAACCTAAATTTAGGCAGGGCAGT
GAAATCAGTTGCATTGGATCCTTGCTACTTCAAGTCAGGTTCAGGAAGAAGATTTCTTAC
AGGTGATCACAGATTGACACTATATGAAAAATCATTCCTTAATCGAATACGAACTACAGT
ATTACATGAATGCAAGGGAAACGTACAAGCCATGTCCTGGCAAGACAGGTTTGTAGCATG
GGCAAGTGAAGTTGGGGTCCGTGTTTATGACCTAGTTGCTAAATGCTCTCTAGGTCTCAT
CCAATGGGAAAAGAACCTAAATAGATCTATTGAAGACTACCGCTGCAATCTTCTCTGGTC
TGCTCCTAAGACTCTAATGATCGGCTGGGTTGATACCATCAGGATATGTGTCATTAGAAA
GCGAAGTCAAATTGAATTACAGACTCGTGATGTCACAGAATACCTCGTGGATCCAATATA
TACCTACCAAATAGATTATTTTATAGGAGGTCTGGGCCCTTTGGACGATCTATTAGTTTT
ATTAGCCGTTCCAAAAGAATGCGATCCTAAAACCGGAAAGTCGCAAATGCCCGTTTTAAT
AGTGGCGAATTATAAAGGCTGCGAATTCTGCGAGATATCTTGGGAGACTTTAGACATAAG
GGGCTACCAAGAATATAACTGTAATGATTACCATTTAGATATGCTTATAGAAGAAAACAG
ATTTTTTATTGTTTCCCCCAAAGACATTATCATAGCGAGCCCTTACGACATTGACGATAG
AGTCACTTGGTTGACCCAACATAGAAGGTTCGAAAAAGCTATTGCCGTGTTGGAAGAGGT
CGGTGGTAAAACTTCTAAGCACTCCGTGATGACGGTGGGCGTACAGTATTTAGATCACTT
GCTCTCTGAACATCTTTATCAAGAGGCTGCCATTCTCTGTGCCAGAATATTTAAAAACGA
TAAAGTTTTATTAGAAAATCAAATATTAAAGTTTGCCGGCGTCAAACAACTTAGAACTAT
AAGTCCCTACGTGCCGAAGACGCCTGAACAAGCTTTAAGTCCTTACATATACGAAATAAT
ACTTTTCGAATACCTCGAAGTGGATTCGCGAGGATTTTTAAAAATAATTAAAGAATGGAA
TCCAACTCTATACAAAACGAGCGTCGTTATAAACAAAGTAATCGAACATTTGTTAAACAC
CGAAGTTGACACGAACGTGTATCTGGAAACCTTAGCTTTACTTTACTGCCACCAAAAGCA
ATACGATAAAGCGCTGACAACATTCTTAACATTGCAACACAAGGATGTATTCAAATTGAT
AACAGACCACGAAATCTACAACATCATACAGGACAAGATACTCGATCTAATGACGCTAGA
CTGCGACCAGGCTATATCGATACTCTTGAATAACACAAAAATCCCTGTTGAGGTCGTCGA
ACAACAACTGGCAAATCACGAAGAATATTTGTATAAGTACTTAGACGCGTACAGCAAGAT
GGAACCGAACGGTCGATACCATGGAAAACTGGTTCGTCTATACGCCAAATACAACAAAGA
AAAACTGTTGCCTTTCTTAAGATGCAGCGATAATTATCCCATACAGGAAGCTTTAGACGT
GTGTCAGGCCAACAATTTTTTCCCAGAAATGGTTTTTCTACTCGCGAGAATCGGCAACAC
CAAGGAGGCATTGCAGATAATTATCGAACAGTTAAACGACATAAACCAAGCCATAACTTT
CTGTCAAGAACAAAACGATATGGAACTTTGGATAGATCTGATACAGCAGACGGTCGACAA
GCCGGAATATGTCACTTTACTTCTGAAAAGGATAGGGAACTACGTGGACCCGAGGATGTT
GATACAGAACATCAAACCGGGCTGCGAAATAAAAGACCTCAAAGAGTGCTTAGCCAAAAT
GATGTGCGACTATCATCTCCAGCTATCAGTGCAGGAGGCCTGTAAAGTCATTACGCTGAG
GAACTATTTTGATTTGCATGAAAAGCAAGTGATGGCTCAACAACGAGGCATATCGGTGAC
CGACGACTTCCTCTGCTGCGTTTGTCACGGGCGGATCATAATAAGGGACATGTCGAATGC
TTCTGACCTTCTAGTTTACAATTGCAGACATTCCTTCCACGCCGGCTGCCTCCCGGAAGG
CGACCAGTGTGCTGTTTGTAATGCGGTCAGAATGTGACCCATATTTATTGAGCTCAATCA
TTTTGAAATCAAAATTTGACTAAACAAAGATAGAAGTGGTCTGAATACGAATATTTTTTT
TTCATTATATAGATTTATCTGACGCAATATATCGCCATCTGAATTATATAAAGCCCTAAG
TCAACATTGTCTGATGGCGATGGGAGGTTTTACATTAAAAACCCCCTCAAATCACTAATA
TAATTTTAGTCGTAGTGATTGATATCCATAGACACCGATCGACAACCTCAATAGATAAAA
TAAGTACTTACATCTGTTCTTATTACACACACAATTGTGTAATAACAGAGACCGCTCTAA
AATCTTAATAATATTTTTAATAATTGGTTTGATGTTTCGGACGCCCAGACTACGCTACTG
TAAGGTATTGTCGTAAAATTGGATCGCTTCTAATCTTTGTTAGAAACATTTATATATACT
CATGGTCCATTGTAATAAAATAATATTGTTATTTTTTTTTATTGTTAGCTGACAAGAATA
CGGCCCAACTGATGATGAGCGGTACCGTTGCTCATGGACGTCAGTAATGCTATTGGACAG
TCAGGCCGCTGCCTAAATGTAAAGCCTCGCAGCAGTGAGGAGAAGAGAATTAGTTGCTCT
TTGTTATTCTAATACATAATACTATAGTCTATTGTAATTTTATTTTAATCCTTCAACGAA
ACCTGTAAATTTTTGACTTGTATAATTTGTGTGTTAATGTCTAAAGTTTTCTGCCAATTT
AAAAAATAATTAATTATAAAACATTAACTAAAGTAAATGATAAGCCTATTGATTAAGAAT
TCATTTGATTAGTGTACTTTGTAAATGTTTGTGCTTTATTCGGTATTCGAGATCGGAAGA
GCGTCG
(3486 bp)

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