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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31576_c0_g1_i4
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		proteasome_activator_complex_subunit_4_isoform_X2_[Bombyx_mori]
Ontology
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
Transcript
Level		FPKM:0.28 TPM:0.15
ORF EntryO_BomoIG100351_complete:A_BomoIG_DN31576_c0_g1_i4
Sequence
(Nucleotide)
TCATATTGTTTATGCTAATACCAAATAAAACGGACCTTTAAATAAAAAGATAAATGCAGC
GTATTAAGCGAAATGAAGCTTAAATCAAATTTCTTTACAGCCCTCTTATGGTCTTATTCA
CACTACGCGGGCTGTGAATTCGTCTAGTGCCCTAATAAATTAATCAAATAATAAAACTCA
TGAAACTGATGCTTACAACAACACTGGCTCTTCGTTGGGTTGCGGTAAGAAATTCCCGCA
TGATAACACAGCCACCAGAACATAGAAACACCTGCATCTCTCCTCGCGACTCATTTCACA
GTCACCGTTCACCCACTGCTTTAACTTCGATATCTCGGGCTTCATGTATCTGTCCAAAAG
CATTTGGGCGCATTCGGCCTCCTCCTTGCAGGGGACGTGCCATTTGAAACTAAGGTCTTT
GAGCTTGCAGCCGTGGCCCCACTCCCTGACCGGCAGCCACGTTTGAGGCGCTGCACTGTA
ATCCTTAGTCGAACTCTTCCATTCTTTCAGCTCAATGCAGTTGAACGAAATCAGCATGTG
GGCGAGGATTTCGGAGGCCCGATTCAATGCGTAATACGTTTGAATTTTAAGTGCCCGATC
CAGTACAGGAATAATTCTGGGGACATACTTTAAGAGAACCGTCCCATCGCATTCTACTAA
ATGCATCAATAGTACTAGTCTGTACATCAGGTCTCGTGGGGGATTCTCTTCCTTGAGAGC
ATCGTCGCTCGCTAATAACTCGTCGAGTTCATCACAAAGAAGAGGCAGAAATGCGGCTAA
TGTCGATTCGGGGTCGACTCGAGCAAACACACGGAGCAACACCCCGACCATACTGCCAGA
CACGTTTGTCTCAAACGTGGTCTGCGTGGCGAACGATTTGAACTTCCTCAGAGCCTCCTT
AAATATTTTAGGAGAGCACTGCATTAGCACAGCAGTTGTAGCAGAAGACAACGCCGCCTC
CATGACCGCATCAGCCTTACTTCGCATCCCGTCCGACTCTTTGGTGTCCAAGCGCACGTG
TTCTAGTACACTGGATTCTACGATCGAGAAAATCTTCTCAAAGAAAACTAAAACGAAGTC
TTCAATCTGCGCGGTCGACTCGCACGTCAGCAATTCCTCCTCGGTCAGATCCGGCCAGTA
TTCGTGAGCCGAACTACAATCTATCAACGGCACCATCCAACTGAAGAACAAAATAAAATG
AAGGGAAACCAATGTTTTCTTGATATCGTTCGGATCGAGACCTGGGAGCACGGCCATCAG
GATGTGGACGATATGAGTGGGACCTTCCAAATAACCGGCGTCGGGACCTCGCACCATCGG
CCTGGCGACTGCGGCCAGCCCGGACATGGCGGCCGTGACTCTATGGGGCTCGGTCAGGGA
ATTCAAGGAAGTCTTAAATTTTTCCAGCAACGGTGGAATAACGATAGCAGGTCGCAGTGT
AGCTAAATTTTGTAAGGCAAATGATACTTCAAGACTGTCGACTCGATTATACAAAGCTTG
CAATGTAGGTTCTAAAACTATGTTTATGAACTCAGTTATATCTTCTTCTCTCAGTTTGTA
ATGTTCAGGTACTTGATTCTCCCAGCTCTCTTTAAATTTGTGCTCAGTTTCTCGACGATA
CCTGTTTAGGAATTCTTTGGTAAGCTTTTTTAGAAAGTCCCTAAGTTTATATGACCATCG
ACCCGAGTTCGCACTGTGCAAGTAACTTTCTACGCCTCCCATAAAACAACGCAGGTGTTT
AAGAACCACTCCATCGGGGCAGATACTCCATACAATCCACGAGGCCATGTGTTTTGTATC
AAGAGTGTAGTGATTGTTAATTTGCATATCTTTATAACTGACGGGAAGATTTAATGCATG
AAGGAATCTCGAGAATATTCTAGGAGCATACTGTGACCAGTTTATCACACCGGGATTTCT
CTTTGCCAGACCAGTAAATATTATCATCAGATCCCATACTCCACACTGAGCATTGTAGCA
AGTGTCCCATAAAACCATCAGCTTCTCAAACCAAAGTTCGTGACCTAACGCCGAGTTCCG
GGGATGTAATGCAACAGGAAGAAATACTACCAGTTGACTCAATACATACGAGTCCGCTGT
CCAGGGGTTGATTCGAGGTAGTAACAAGTCTAATATCTCCTTTGTTGCGCTCAATTCGAA
ATATGGTCTTGCGCACTTCACCAATGCAACATATGAACTTTCCAGAGAACTAATATAATG
AAACATTCCAACATGAAGCGCATTCTTATCGAATATTCTTTGTCCTAAGTCATATAGAGG
TCTCCAGGGAAGTTTCAGTTCTTCTGGTGAAATCAGTTGTCTCTTTTTTGTGAGCATAAT
GAACATTGTACTAAACTTATGAACTTTGCTAGGTTCAAGATCTGGAATGATAATAAGCTC
ATATGCCAATTTGATGAGGTCTATGTGGTCAGCTTTACTGAACTTTAGTCCATAAATTCT
TATGTACTTCATTAATCTAGAAAGCCAGACTCCACATGCTGGCTTCATCTCTCGTAACAT
AACAGACTTCGCCAAGTTTATCTTCACTTGTCCTAAAAATCTGGTCGATTCTTCGTCAAG
CTCACTGGCATATGGCAATAAGTGATTCGTCAAAAATTCCTTCTGAGGTTTGAACCCCAG
AGCTTTAATTCGCTCTGGGGTAGTTACCAGAAGTTCATATTCATCGTCCTGTATCATTTT
GTGAATTATTTTCCCACTGTTTTTTTTATAAAAAGTACAAGTCACTGCGCAGATTTAAGT
CATCCGTTTTAAAAAAAGCACAAAATAGAAAAATAGAGAACTCTTTCTTATGTTAAATTT
ACAGTACTCTCGATTCATTAATAGCGGATTGAAACCTTATTTTACTAGTCATCATAATAA
AATTTACGCACAAATGCACACAAATGGAAATACAATTCACTCCACAGAAGTAAAACCAAA
ATTGCTCGACGAGATTATGTAGTATGTAGGTA
(2972 bp)

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