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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31576_c0_g1_i12
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		proteasome_activator_complex_subunit_4_isoform_X2_[Bombyx_mori]
Ontology
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
Transcript
Level		FPKM:16.90 TPM:9.41
ORF EntryO_BomoIG100373_complete:A_BomoIG_DN31576_c0_g1_i12
Sequence
(Nucleotide)
CGCGCGCACCACGCCGCCGCCCACGCCGCCCGCGCTCACGCCGCGCACGCACACGCCCGT
GCTCGCGCGGATCACGGTAGTGAGTAGACTCAGAGCCCGGGCGTGATCCTTGGGTTGGGG
CGCGACGACAGGCGCGTCCCCGGACAGACTGAGGGCCGCGTCGAGCCGATCCACCAGCTG
CTTCTCTAAACGACTACGGCCTATCGATTCTTCTTCACCTTCAACCGCTTCAGACTGCGC
TGCGTCTTCGCTCACGGAAGCTTCAGCGGAGTCGGGCGACAGTCTGGCGACGCGCACCGG
TATCTGTCCGCTTAACGAGTTCCTAGTTCTGGACGTGGAAGCGGCCGACTGCGGAGCCTC
CTCGGCGGCCGTCGCTTGTAGGGGTGACGTAGTCGACGTCAGGGATATTACAATGTCTCC
ATTCTCATCATATAACGGGGCCAGTCTTGGCTGAATCGATTCTATGAAGTCGCCAAGAGA
CAGGGAGTAACCAGTCGGCCCGCCGGGGAACAACACTTCCGTGTCGAACATTGTCGCTAG
CAAACTTCCGACACTTTCCCGCACATTCTGGTAAGGATGCTGTATAAAGTTCGCAGCATC
GAGTTTCTTCAGCAGGATCTGGGACAGCGGTGCAGTTCGCCATTTCAGTGACCCGATGGC
TCCCTGTAATGCGTGCAATCGGGCACACACAACGAAGGATGCCTTCTGATCAGGGTCAGC
ATTAGCTGGCGCTGGTGGCGGAATGGCGAGGTCCACGATCCCCTGCACCACAGTGGCGCC
CCGCAGCGGATCCATCTTCTCCATACCGGTCGCCAAAGCCGTGCCCCAATCATTCATCGT
CTCTGGAGTCACTGATGTTAGACCCGCTTTAAATATCTCTAGTGTGTCGCTGTGCATCTT
CAGAGCGTCGTCTCTGGTCCAGTAGCGCGCGGCCCGCAGCGCGGCGGACGCGACCTCCGC
CGCGAACCGCTGCGGCGCCTCGCGCGTCTCCGCCGCACACCGCAGCGCGTGCGCCGTGAA
CTTGTCCGCTATACGAGGTCCGTAATGAGCGAACAGAAACTTGAAGAACAAGAATCGAAC
GCCGCTGAACTTGTCCTTGCCCTTTTTCTCCTCGACGGTCAGGAACGAGACCAGTTTGTT
AACGTTTTCGTCGTCATCGAAGAACTCGAAAAGGTAGCGTTCGCCCTCCTCCATACATTC
AGGAGGAGGGAATTTACAGCACGTCTGTTGACTTATCGGGGCGGCTACCACCAATTTCTC
GGGCCACTGATAAAATCCAAAAGAAGGACTTCTCAGCCACGGTCTATCCCATTCTTCATC
GTTCTTTGGTATCCTGTCTTCAGACCACATGACCCACTCCACATCTTTTCTGTAACCGGG
TATGTGCTGTGCGGGGCGCGGCAGTCCGGCCAGCTCGTACGGGTCGACGTGTATCTTGTG
CAGCGGGCGCTTGCGCTGCTTGAGCGCGTAGTGCGCGAGCCGCTGCGCCGACCTGCGCAC
CGCCACGTCGTCGTGCAGCAGCCCGCGCGCCGCCAGCCGCACCGCGCGCGCCGGGTACGC
CGTCTGCAGCGACGGGCAGTACACCGCCATGTTGAACGCCAGCTCCAGCCGCCGCCACGG
TATGTTAGGCGTCTCCGCTAAATCGACCAGTTCCAATATTAATTCATTGTACAATCTCTC
ATTTCGATCGGAAAACGCCGTCTCGTTTTGTTTGGCCTTCTTCAGCATTTCGACAAACTC
GGCATCGTTGAGTTGTTCCTCGGTGAGGAGGCGGGCGGCCGCATCTATTGCCGATTGCGG
TATCACCAAACGCGTGTTGACTGCTGGGAAGTTACGGTGTATCGTGTCCCCAAATGCTTG
TTCTAACTTTAGTATACTTGGTTTCTCGCTGAGGGGGGCCTTCAGTATGGCAGGCCACAA
CGTTCTGGCCACTTCCCAGTCCTGTTTAGCAATCAACGGTGCATTCCTCGGACCGAGCAT
CATGTATAACGTCCCTTTGTGACGGGCGTGCCATTCGTCGCCTTCGCCGCCTTTGATCAA
CAATTCAGCCAACTTTGGCACCAGAGTGCGGTAGGAGTAAGGATAATGATTGAGCATCCA
GTACAGTCTGATTTGGGAGAGCATTCGAACAGAAGTGTACGTGTTGACGGACAACTCGGC
CAATGCGTGCAGCGCCTTTAAGGCTATGGGCGTGATCCCCGCCTCGCACACCAGGTTCAC
CCTCGACTCATCGTGTATCCTCGCCGCTTCGGCCGTCAACATCCGCAGTCTGGAGGTCCC
GGCGCCTCCGAACCGATTGGTGGGCCCTGCGCGTCCGTCCAGCACGCGGTCCAGCGCGCC
GTACGATATCAGACGCTCTTCTAGACTGGGACCGACTCTGGAACCCTTCATCACCACCAC
ACGTTCCCATACCTTCGTGAGTAGCTCGAGGCCGCGCGTGTCGTCCGACTTGTCGGCCAA
CATCCGCTCCTGCACTCGGACTAATAGCCGCGTGACGGCGACGCGAACGTTCTCGCCGTC
CAGTGTTATAGAAAACTTAACTCCGTTCGTGTACGGTATACTCGTCGACGGCACTTGAGT
TTCCAATAACAACACTGGCTCTTCGTTGGGTTGCGGTAAGAAATTCCCGCATGATAACAC
AGCCACCAGAACATAGAAACACCTGCATCTCTCCTCGCGACTCATTTCACAGTCACCGTT
CACCCACTGCTTTAACTTCGATATCTCGGGCTTCATGTATCTGTCCAAAAGCATTTGGGC
GCATTCGGCCTCCTCCTTGCAGGGGACGTGCCATTTGAAACTAAGGTCTTTGAGCTTGCA
GCCGTGGCCCCACTCCCTGACCGGCAGCCACGTTTGAGGCGCTGCACTGTAATCCTTAGT
CGAACTCTTCCATTCTTTCAGCTCAATGCAGTTGAACGAAATCAGCATGTGGGCGAGGAT
TTCGGAGGCCCGATTCAATGCGTAATACGTTTGAATTTTAAGTGCCCGATCCAGTACAGG
AATAATTCTGGGGACATACTTTAAGAGAACCGTCCCATCGCATTCTACTAAATGCATCAA
TAGTACTAGTCTGTACATCAGGTCTCGTGGGGGATTCTCTTCCTTGAGAGCATCGTCGCT
CGCTAATAACTCGTCGAGTTCATCACAAAGAAGAGGCAGAAATGCGGCTAATGTCGATTC
GGGGTCGACTCGAGCAAACACACGGAGCAACACCCCGACCATACTGCCAGACACGTTTGT
CTCAAACGTGGTCTGCGTGGCGAACGATTTGAACTTCCTCAGAGCCTCCTTAAATATTTT
AGGAGAGCACTGCATTAGCACAGCAGTTGTAGCAGAAGACAACGCCGCCTCCATGACCGC
ATCAGCCTTACTTCGCATCCCGTCCGACTCTTTGGTGTCCAAGCGCACGTGTTCTAGTAC
ACTGGATTCTACGATCGAGAAAATCTTCTCAAAGAAAACTAAAACGAAGTCTTCAATCTG
CGCGGTCGACTCGCACGTCAGCAATTCCTCCTCGGTCAGATCCGGCCAGTATTCGTGAGC
CGAACTACAATCTATCAACGGCACCATCCAACTGAAGAACAAAATAAAATGAAGGGAAAC
CAATGTTTTCTTGATATCGTTCGGATCGAGACCTGGGAGCACGGCCATCAGGATGTGGAC
GATATGAGTGGGACCTTCCAAATAACCGGCGTCGGGACCTCGCACCATCGGCCTGGCGAC
TGCGGCCAGCCCGGACATGGCGGCCGTGACTCTATGGGGCTCGGTCAGGGAATTCAAGGA
AGTCTTAAATTTTTCCAGCAACGGTGGAATAACGATAGCAGGTCGCAGTGTAGCTAAATT
TTGTAAGGCAAATGATACTTCAAGACTGTCGACTCGATTATACAAAGCTTGCAATGTAGG
TTCTAAAACTATGTTTATGAACTCAGTTATATCTTCTTCTCTCAGTTTGTAATGTTCAGG
TACTTGATTCTCCCAGCTCTCTTTAAATTTGTGCTCAGTTTCTCGACGATACCTGTTTAG
GAATTCTTTGGTAAGCTTTTTTAGAAAGTCCCTAAGTTTATATGACCATCGACCCGAGTT
CGCACTGTGCAAGTAACTTTCTACGCCTCCCATAAAACAACGCAGGTGTTTAAGAACCAC
TCCATCGGGGCAGATACTCCATACAATCCACGAGGCCATGTGTTTTGTATCAAGAGTGTA
GTGATTGTTAATTTGCATATCTTTATAACTGACGGGAAGATTTAATGCATGAAGGAATCT
CGAGAATATTCTAGGAGCATACTGTGACCAGTTTATCACACCGGGATTTCTCTTTGCCAG
ACCAGTAAATATTATCATCAGATCCCATACTCCACACTGAGCATTGTAGCAAGTGTCCCA
TAAAACCATCAGCTTCTCAAACCAAAGTTCGTGACCTAACGCCGAGTTCCGGGGATGTAA
TGCAACAGGAAGAAATACTACCAGTTGACTCAATACATACGAGTCCGCTGTCCAGGGGTT
GATTCGAGGTAGTAACAAGTCTAATATCTCCTTTGTTGCGCTCAATTCGAAATATGGTCT
TGCGCACTTCACCAATGCAACATATGAACTTTCCAGAGAACTAATATAATGAAACATTCC
AACATGAAGCGCATTCTTATCGAATATTCTTTGTCCTAAGTCATATAGAGGTCTCCAGGG
AAGTTTCAGTTCTTCTGGTGAAATCAGTTGTCTCTTTTTTGTGAGCATAATGAACATTGT
ACTAAACTTATGAACTTTGCTAGGTTCAAGATCTGGAATGATAATAAGCTCATATGCCAA
TTTGATGAGGTCTATGTGGTCAGCTTTACTGAACTTTAGTCCATAAATTCTTATGTACTT
CATTAATCTAGAAAGCCAGACTCCACATGCTGGCTTCATCTCTCGTAACATAACAGACTT
CGCCAAGTTTATCTTCACTTGTCCTAAAAATCTGGTCGATTCTTCGTCAAGCTCACTGGC
ATATGGCAATAAGTGATTCGTCAAAAATTCCTTCTGAGGTTTGAACCCCAGAGCTTTAAT
TCGCTCTGGGGTAGTTACCAGAAGTTCATATTCATCGTCCTGTATCATTTTGTGAATTAT
TTTCCCACTGTTTTTTTTATAAAAAGTACAAGTCACTGCGCAGATTTAAGTCATCCGTTT
TAAAAAAAGCACAAAATAGAAAAATAGAGAACTCTTTCTTATGTTAAATTTACAGTACTC
TCGATTCATTAATAGCGGATTGAAACCTTATTTTACTAGTCATCATAATAAAATTTACGC
ACAAATGCACACAAATGGAAATACAATTCACTCCACAGAAGTAAAACCAAAATTGCTCGA
CGAGATTATGTAGTATGTAGGTA
(5363 bp)

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