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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31575_c3_g1_i6
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		regulation_of_nuclear_pre-mRNA_domain-containing_protein_1B_isoform_X1_[Bombyx_mori]
Ontology
GO:0000993 F RNA polymerase II complex binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0010564 P regulation of cell cycle process
GO:0016591 C RNA polymerase II, holoenzyme
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:0.25 TPM:0.14
ORF EntryO_BomoIG100124_complete:A_BomoIG_DN31575_c3_g1_i6
Sequence
(Nucleotide)
GTGCTCTTCCGATCTTTGTGATTCTTGGTTATTATTTTGATTTTAATAAAGACTGACTGA
TAAACTATGGCTGGATTTACTGAAAATGCATTGGTGCGGAAACTTCAAGATTTAAATTCT
AGTCAACAAAGTATTCAAACATTATCTTTGTGGTTAATTCATCATAGAAAACACCACGCT
GCCGTTGTTAAAACTTGGCTAAAAGAATTACTTAAAGCCAAAGACAGTAAACAACTCACA
TTCATGTATCTTGCTAATGATGTAATACAAAACAGTAAGAAAAAGGGACCTGAATATGGA
AAGGAGTTTGGGGAAGTTCTTGTAGAATCATTTCAACATATGGCCAAAACTGGAATGGAA
TCTAAAACAAAGCATTCCTTGCATAGAATATTGAAGATATGGGAAGAAAGAGGTGTATAT
GATGCAGAAAAAATTAAGGACTTTAAAGATGCTATTGCTGGCATCGAAGCACCCGTCACT
CCGAGCAAAGTTAGCAAACGTAAATCGACTGATACAGAACTTAAGGAGTCTACCAAAAAA
CATAAAATAGAATCTAGATCTAAGACTGAACGAAGAAGAAGCGAGACAAAAGTTGAAGTT
GACGGGCAAATAGAAACCCATACGACGTTGAGTCCTAAAACACCTCCTGGAGACCCACCA
GAGCCTGAAGAGTTGATTAAGGCTCTTTTAGAATTAGAATCAAGTGCATCCAGTGATGAA
GCTGTCAGAGAACGTATTGCATCTCTGCCTCCTGAGGTCTCTGAAGTTCAGTTATTATCT
AAATTAGAAGATAAAGAATCTGCCCTGAGCCTAAGTGCAGTAGTGAATTCAGCAGTAGAA
TTACTAGCTGAGTATAACTTGAGGCTAACTGAAGAGTTAGAGAAGAGAAGGAAAGTGGCT
GGAATGTTAAGGGACTTTGCACAAGCACAGCGGGACCTTGCTAAACAGGCAGAAACTAGA
TTAGAGGAATACAATGTGAAACTCCAAAAAATATATGCAGTCAAAGCCGAAGTGAAGCAT
CATATTGAGAACCTCCCTGACGTGTCTCGCTTACCGGACGTAACCGGAGGCCTCGCGCCC
CTTCCCTCCGCCGGCGACCTGTTCAGTGTCTGAGAAATATTGGATTTTAATACACCGTGA
TTAAAAAAAAAACATTTGACAGTTCCGATAAATGTCAACTGTTATGGCAAACGGTTATGT
ACACACATGCACCTACCACAACAGTATTTAATTATGGGCAGTACGTGTACAAAATTAGCT
TAAAGCGTACGTAGAATCGTAGCTGAATACGCATGGCGTAAATATTAAACGTATAATTAT
ATTATTTTCAATGGGATTGCAATATGTTAAAATAGGAATAATATACCAGACGTGACTTTT
GATGGTAACTCAGTACAACATGTTTAGTATTCTGACATTAAATTTAAACACAACTCATGC
TTACATATATTGTCTTTGCTTTTTGTGGGTAAAAATCAATAGAACGAATAAGGAAGTGGT
TTTTACACAAAATCACAACCAAGGAATATACATATTTCATTTATTTTATGTTAGAACAGT
ATATTTTAAATTTAGTAGTTTTTCGAAGTTTTAGATAAAAACACATGGAGTTTTGATTTA
TCGTTTGCGGGTCCTCGATAAATATGGAGTGGTGTCTATCTAAAGCTAATAGCTTTGAAA
TACTATTATATTTTTGTTCCTTAATAGATTTTCCCTTTGTTCAAGCGAGACCCATACAGT
GCGAAGTTTTGTGGTCGTGAGTGACGAAAGAAAAAATATGAATGTTAAATAAAATTGTTT
AAAATATTAATTTGTTTCAATCATCGCCTCGCAAAAATCACGGTGTATTTAAATAATTTT
TAATTGCTTCAATAATCATAATTATATTAAAAGACCCAAAATAACAGAAACAATACTTAT
TTATCAAGCTATTTGATAAATTTAATTATGACCCAAATAAAGTATGCTTTTGTTAGAGAC
TAATAAATGTCTTATTTTTGTCTTAAGAACACAAATGCTAACAGACATGTAACATAATTT
TGTTTTAGTTTCCTTAGTCAATATTAGGTAATTAGTATCCTTGATATTATGCATGAAAAA
TTCAAAATGCTATTGTTTTTAGAGTGTTATGTCCAATGATATGACATAAGTTTTTATTCA
ATATTTGGTGAATATTTTCATTTAACTATTGTTCGCCTAATATATTTTTTGTCAAGCCAT
TTTCTGTCGTGCATGAATTTTTATATTTAGAAATTGAAATCATATCCTAGAGACTTAGAT
AATAGAACATACTCAGTTCTTGATGAATTCTTCTAATTTATTTTGATTTCTTCTGATTTA
TAAAAATTGTAGAAACATTACCATACTGGTTGGTATACAGTGACTTTATGCTCGATTGAA
AAATATGAAAAGTTTTTTCCACTTGGTTTATAAATTCGGAAAAGTATTAAAAATATTGAT
AGCGAAAATAGCGAAAAAGGTGTAAACCTTAGTAATGAAAAAATTGGTTTTACGGATTCA
CTAGAAAAAATGTTCGTTATGGTACATTGTAATTTGGTATATATTTCATTGCTACCTTTC
ACTGCTACATTCGAATAGCCATAATAATTTGCACTGTAATTAACACCTTTATGTACTTTA
TTTATTGGCCCATTAAGGTAGTCTAGGAACACTTGTAATTTAAGTTTCACAAGAGTGCCT
AGTTCTATTCTACCCTCTATTATTTTGATTCACAACTTTGCAGCACTTTTTAAATGTAGG
ATATTTTCAGAGATTATTTAGATATATTGTGACTTAATATTTTTGGTGCATTTTTAACAC
AGTCAAAAATCCTACTGTGCTGCATCTTCACTCTTTGGTTATTGAGGGTAGAAGTAAAGC
CGGCTTTTGATTATGGGATGTAATAGGTATATATATCACATCTTGAGCTATATATTACAT
CCCGTGAATGCTGTTCACACTGTAAGTTAAATAACATTCAAAATACGTCATCAGCTAACA
CGTCTGCACACGAACATCACCATTCAGAGGGCGAGGCAGGGGGAGACGCGGTATCGGGGG
ACATGAGGTAAAATATACTGCTTCGAAATATCGCATATTTGGTCGAAAATATATTTATAG
TCTGGGTGTAATAGCACAGTGTGAGAGGTCTCGTACAATATGTATGACGAACTATGAAAT
ACTATATCTCAAGATGTAACATATATTTTATTATATCCCATAGTCAAAAGCCGGCATTAG
GAGCACCATCTCAGTGTGTTAAAAAGTGTCCGTTAAAACGGAGCCAATTATGGTGGCGCC
ATAGTAGCAAGTGGAATGATTTCAAAAACAGCGCCATAAACGATTAGA
(3348 bp)

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