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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN31567_c2_g4_i5
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		cleavage_and_polyadenylation_specificity_factor_73_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0006398 P mRNA 3'-end processing by stem-loop binding and cleavage
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.17 TPM:0.10
ORF EntryO_BomoIG100179_3prime_partial:A_BomoIG_DN31567_c2_g4_i5
Sequence
(Nucleotide)
GGGCGGGGCGCCGGGGGGCGGGCGCACGGGGGACAACGCGGCGTGCAGGTGCTGCAGCGC
CGACCTTACGCACGACGCCAGCGACGGCTCCTCGGGACACCGGACCTCCATGCTCTGCAG
GTCGATGTCGGCGCGCTTGTCGTCGACGGTGACGTACAGCTTGTCGCCCTTAAACATCTT
CGGCACGGAGTCTTCACCGAACATGTCTTGGAACATTTCTATAACGCACTCCTTGAAGTG
CATGCGGTCGAGCTTGGGCGCGAGCGGCGGGTGCGTGGCGGCGGGCGCGGCGAGCGCGGC
GGCGGACAGCGCGGCGCCCACCAGCGCGTCGGCGTACATGTCGGCCACGGGCCCGGCGCG
CCACTGCAACACGCCCAACTTTTTGTGTAAACATATACTTTAACATTACAATTTTTCGCT
AACAATTACTTCAAACCGAGACATTCCCCCGCGCCCCGCCCCTCCGCTCGGTCCCCTTGC
GGCGCTGCGCAAGTCGACACGCGGAGGGACCCGAAACACCTGAAAATTCCGACGAGATTA
TTGTTATGAGAGTCTTCCGTTTAACGGCGAAAGGGCGCTCGCTCTCTTTCCTACGCAACC
GACAGCGGGCCGGGGCGGGGACAGTCAAAGTTCAGATAAAGGCGTCGTGTGCAGTAGGAC
TGCTGAGAACTATGTACTGACTTCGAGCACTATGGTGCTGCTCTCGATGGTGAGCTCGAT
GCAGGAGTAGAGGCGCCACCTGGTCTCCGAGAGGAAGTCGATGTGTCCGGCGAGCTGCAT
GAGCACGTGGCGCAGCAGCGGGACCGAGCCCGCGTACTGCAGCGACTGCCGCTGCGTCAC
CTCCGACTGGACCAGCTCCGTGTACTTGTTGAGGTCTGCGGGCGCCAGAATGTGATAATT
GAAGTTTCTTTTGACGAGGATGCCCTGCAGCTCCTGACCTTCCTTGGGAGGGTCTACCGC
CAGGGAGCCCATCACCTTGGCGGTGGTGTCTCCGCGGAAGCAGAGCGCGAGGGGCTGCGT
GTTGCGCGGCGTGTGCACGAGGATGGCGCCGCGGTGCTCCCGCTCCAGCGCCGCGCGCAG
CCGGGACATCTCGTTCTGCTCGCCGTGCACCAGCACCACGTGCGGCGGCTTCAGGATGTT
GATGAACTCCGAGGTCTGCTGGTAGTCGGTGTGCGCCGAGAACGAGATGTAGTCCACGGA
CATCCGCAGCGGCAACTTCTGGCCGGACATGGTCGTAATCTCGTCCGGCTCCGACAGGAT
CGTCTTCGCCAGCGTCCCCTCCACGCAGTAACCCGCTATGATGACTCCGTTCTTAGGGTC
GGTGCACCAGGACTCGAACAGCTCCCGAGACAGTCCCGACTGCATCATGCCCGGGGACGC
CATGATCACGCACGGCCCTATGTCCTCAAAGTGGTCTATGCCCTTCAGGTTGGAGATGTG
TCTAAACACGAAGGGGTTGTTGATAGCGATCTGGCGCCGGATGCGGTCGTTCATCGCGTT
AACATAGGTCTGGTACACCGCCATGCACTTCTTGGCCAGTGAGGACGCGTAGTATATGGG
AATGTCTTGCAGCTCGGGGTGCAGCGACCAGTACTCGTCGAGTATGAGCAGCAGCTCCTG
CGCGCGGCCCAGCGCGAACACGGGGATGAGGCAGCGGCCGCCGCGCCCCACGATGTCGCT
GACCAGCCCCGTGAAGCGACTCTCCCGCTCCTCGCGCTTCTCGTGGATGTGCGTGCCGTA
CGTGGACTCAGTAATCAAAACATCAGGATGAACCGTCGGTATCTCTGCAGCCATCAAATG
TCTATCCTCTTGTCTTGAAAAATCTCCCGTGTATAATATCTTGACTCCAGCTATTTCAAT
CATAAACATGGCTGCTCCGAGTACATGTCCAGCATTGTAAGCCCAAAATTTGACACCCCG
TACATCTCTTTCTTCATGGAAGTTTATAGTTTCTATTCTGTCCATTGAATTTTCTAGATC
CGATTCCGTATACAACATTTGTTCTGTTGATATGTTGCTAACTTTAATATAATCAGAAAC
GAGCCATCTGTAGATAGCCTTAGTGGCATGTGTCATGAAAACTCGACCTTTGAAGGAAGT
CTTCGTCAGGAACCACGGAAGGGCTCCACTGTGGTCCAAATGAAAATGTGAAACTAACAG
AAGATCCACTTCGTCTGCCTCTATAAGGTCTATGAAGGGTAGGGCGTCCATTCCAGACAA
ACCAGGATGGATGCCACAGTCCAACATTATCTTTTTCCCTTTGAACTCCAACATGATGCA
TGATCTGCCAACTTCTTGGCCAGCTCCAAGTGGTCTTATTGTCAATTGATCGCTTTCCTC
CGCAGGCACTGGATCAGTGCCTTTTCTTGGATTTGTAGTCATTTTGTTTATTTACAAATA
TTCATTTACAGGGATTTAACCAATAGCTTAATCACAATAAGATAAAACTTTGTGGTGTTA
TATTATAAGTGACGATTAATCAAATAACGTATAATAACTACCATTAAGATTTACTTTATA
AGTTAGAATCAGTTCCTGTAATCCAGTCAGTTACAATTTAGAAACATGTTAGGTTATGGT
ACGGTACCGATTTTTG
(2596 bp)

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